Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_K01
         (1055 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83219-3|CAD57687.1|  965|Caenorhabditis elegans Hypothetical pr...    29   5.6  
Z49127-2|CAA88949.1|  245|Caenorhabditis elegans Hypothetical pr...    29   7.4  

>Z83219-3|CAD57687.1|  965|Caenorhabditis elegans Hypothetical
           protein C31C9.6 protein.
          Length = 965

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
 Frame = +2

Query: 680 PAPXPPSY--TXXXXXXPXAVPXAHPTHXPLPXSXXPQNCPVXXPXPSSXXQ 829
           PAP PPS          P  V  + P   PLP    P + P   P P +  Q
Sbjct: 465 PAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPALEQ 516


>Z49127-2|CAA88949.1|  245|Caenorhabditis elegans Hypothetical
           protein F13D12.3 protein.
          Length = 245

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 15/54 (27%), Positives = 17/54 (31%)
 Frame = +2

Query: 656 PXXSXPXXPAPXPPSYTXXXXXXPXAVPXAHPTHXPLPXSXXPQNCPVXXPXPS 817
           P    P  P P  P+        P   P       P+P    P   PV  P PS
Sbjct: 118 PPQFYPAQPGPAVPAVIPPVVTQPIVPPPVPEVSEPVPEPPIPAPGPVAPPTPS 171


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,132,215
Number of Sequences: 27780
Number of extensions: 104890
Number of successful extensions: 341
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 330
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2814342022
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)