Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_J24
(1103 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 39 0.001
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.013
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.041
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.16
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.22
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 30 0.66
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 1.2
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 1.5
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 1.5
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 28 2.7
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 39.1 bits (87), Expect = 0.001
Identities = 22/59 (37%), Positives = 26/59 (44%)
Frame = +1
Query: 784 PTTXPPXHPXGWXPXHLXXPHHPPXPXPXPXPLTPXSPPXPPXQXXPXTXRPPXPXPAS 960
P + PP P P + P PP P P P P +PP P P + PP P PAS
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPP--PSAPPMP---AGPPS-APPPPLPAS 1738
Score = 26.2 bits (55), Expect = 8.1
Identities = 14/45 (31%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
Frame = +1
Query: 823 PXHLXXPHHPPXPXPX---PXPLTPXSPPXPPXQXXPXTXRPPXP 948
P H P P P P P + +PP P Q P P P
Sbjct: 1451 PMHAVAPVQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVP 1495
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.5 bits (78), Expect = 0.013
Identities = 22/62 (35%), Positives = 25/62 (40%)
Frame = +1
Query: 772 PXGXPTTXPPXHPXGWXPXHLXXPHHPPXPXPXPXPLTPXSPPXPPXQXXPXTXRPPXPX 951
P P + PP P G P P P P P + P +PP PP P PP P
Sbjct: 428 PPSLPPSAPPSLPMG-APAAPPLPPSAPIAPPLPAGM-PAAPPLPPAAPAP----PPAPA 481
Query: 952 PA 957
PA
Sbjct: 482 PA 483
Score = 29.9 bits (64), Expect = 0.66
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = +1
Query: 784 PTTXPPXHPXGWXPXHLXXPHHPPXPXPXPXPLTPXSPPXPPXQXXPXTXRPPXPXPA 957
P P + G P PP P P P T PP P PP P PA
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPP--PLSSSRAVSNPPAPPPA 394
Score = 29.1 bits (62), Expect = 1.2
Identities = 23/65 (35%), Positives = 26/65 (40%), Gaps = 10/65 (15%)
Frame = +1
Query: 796 PPXHPXGWXPXHLXXPHHP-PXPXPXPXPLT----PXSPPXP--PXQXXP---XTXRPPX 945
PP P P + P P P P P T P SPP P P P T +PP
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPL 292
Query: 946 PXPAS 960
P P+S
Sbjct: 293 PPPSS 297
Score = 29.1 bits (62), Expect = 1.2
Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 6/57 (10%)
Frame = +1
Query: 808 PXGWXPXHLXXPHHPPXPXPXPX---PLTPX---SPPXPPXQXXPXTXRPPXPXPAS 960
P G + P PP P PL P +PP PP + P T R P P +S
Sbjct: 326 PIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSS 382
Score = 26.2 bits (55), Expect = 8.1
Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Frame = +1
Query: 865 PXPXPLTPX--SPPXPPXQXXPXTXRPPXPXPAS 960
P P P P +P PP T PP P P S
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPS 422
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.9 bits (74), Expect = 0.041
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +1
Query: 841 PHHPPXPXPXPXPLTPXSPPXPPXQXXPXTXRPPXPXP 954
P P P P P P+ PP PP PP P P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 31.5 bits (68), Expect = 0.22
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 4/49 (8%)
Frame = +1
Query: 823 PXHLXXPHHPPXPXPXPXPLT----PXSPPXPPXQXXPXTXRPPXPXPA 957
P + P P P P P P P PP PP PP P PA
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 28.7 bits (61), Expect = 1.5
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 850 PPXPXPXPXPLTPXSPPXPPXQXXPXTXRPPXPXP 954
PP P P TP P P P PP P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 27.9 bits (59), Expect = 2.7
Identities = 21/70 (30%), Positives = 22/70 (31%)
Frame = +1
Query: 745 PPHXXAXVXPXGXPTTXPPXHPXGWXPXHLXXPHHPPXPXPXPXPLTPXSPPXPPXQXXP 924
PP A + P P P P P P PP P P P PP PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPA---PIMGGPP--PPPPPPGVAGAGPPPPPPPPPAVSA 787
Query: 925 XTXRPPXPXP 954
R P P
Sbjct: 788 GGSRYYAPAP 797
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.9 bits (69), Expect = 0.16
Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = -1
Query: 953 GXGXGGRXVXGXX-WXGGXGGEXGVRGXGXGXGXGGWWGXXRWXGXHPXGWXGG 795
G G G G + GG GG G G G G G GG+ G G P G+ GG
Sbjct: 212 GFGGEGHHHGGHGGFGGGPGGFEGGPG-GFGGGPGGFGGGLGGFGGGPGGFGGG 264
Score = 29.5 bits (63), Expect = 0.87
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = -1
Query: 947 GXGGRXVXGXXWXGGXGGEXGVRGXGXGXGXGGWWGXXRWXGXHPXGWXG 798
G GG + GG GG G G G G G GG+ G G P G G
Sbjct: 222 GHGGFGGGPGGFEGGPGGFGGGPG-GFGGGLGGFGGGPGGFGGGPGGHGG 270
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.22
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Frame = +1
Query: 823 PXHLXXPHHPPXPXPX---PXPLTPXSPPXPPXQXXPXTXRPPXPXPAS 960
P L PP P P P P+ +PP P + PP P P+S
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSS 1071
Score = 31.1 bits (67), Expect = 0.29
Identities = 20/72 (27%), Positives = 22/72 (30%)
Frame = +1
Query: 745 PPHXXAXVXPXGXPTTXPPXHPXGWXPXHLXXPHHPPXPXPXPXPLTPXSPPXPPXQXXP 924
P A P P P G P PP P P P P P P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Query: 925 XTXRPPXPXPAS 960
+ PP P PA+
Sbjct: 1175 SSGIPPVPKPAA 1186
Score = 29.9 bits (64), Expect = 0.66
Identities = 18/61 (29%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Frame = +1
Query: 778 GXPTTXPPXH-PXGWXPXHLXXPHHPPXPXPXPXPLTPXSPPXPPXQXXPXTXRPPXPXP 954
G P+ PP P P PP P P P P P P PP P P
Sbjct: 1058 GAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAP 1117
Query: 955 A 957
+
Sbjct: 1118 S 1118
Score = 29.5 bits (63), Expect = 0.87
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +1
Query: 850 PPXPXPXPXPLTPXSPPXPPXQXXPXTXRPPXPXPAS 960
PP P P P P P P PP P P+S
Sbjct: 1208 PPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSS 1244
Score = 29.1 bits (62), Expect = 1.2
Identities = 23/80 (28%), Positives = 25/80 (31%), Gaps = 9/80 (11%)
Frame = +1
Query: 748 PHXXAXVXPXGXPTTXPPXHPXGWXPXHLXXPHHPPXPXPXPXPLTP----XSPPXP--- 906
P A P P P G P PP P P P P +PP P
Sbjct: 1097 PSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPS 1156
Query: 907 --PXQXXPXTXRPPXPXPAS 960
P P PP P P+S
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSS 1176
Score = 27.5 bits (58), Expect = 3.5
Identities = 17/59 (28%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Frame = +1
Query: 784 PTTXPPXH-PXGWXPXHLXXPHHPPXPXPXPXPLTPXSPPXPPXQXXPXTXRPPXPXPA 957
P+ PP P G P PP P P +P P P PP P P+
Sbjct: 1079 PSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPS 1137
Score = 27.1 bits (57), Expect = 4.7
Identities = 18/73 (24%), Positives = 22/73 (30%), Gaps = 2/73 (2%)
Frame = +1
Query: 748 PHXXAXVXPXGXPTTXPPXHPXGWXPXHLXXPHHPPXPXPXPXPLTPXSPP--XPPXQXX 921
P P P+ PP + P P P P P PP P
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPK 1202
Query: 922 PXTXRPPXPXPAS 960
P PP P P++
Sbjct: 1203 PSVGVPPVPPPST 1215
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 29.9 bits (64), Expect = 0.66
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 850 PPXPXPXPXPLTPXSPPXPPXQXXPXTXRPPXP 948
P P P P P PP PP + PP P
Sbjct: 729 PAPPTPAPTPAVKHHPPPPPVRSSISPSMPPAP 761
Score = 26.2 bits (55), Expect = 8.1
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 844 HHPPXPXPXPXPLTPXSPPXP 906
HHPP P P ++P PP P
Sbjct: 742 HHPPPP-PVRSSISPSMPPAP 761
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.1 bits (62), Expect = 1.2
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 841 PHHPPXPXPXPXPLTPXSPPXPP 909
P +PP P P P P PP PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPP 28
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.7 bits (61), Expect = 1.5
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +1
Query: 829 HLXXPHHPPXPXPXPXPLTPXSPPXPPXQXXPXTXRPPXPXPAS 960
H+ P P P TP S PP P PP P PAS
Sbjct: 114 HIGKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPP-PSPAS 156
Score = 26.6 bits (56), Expect = 6.2
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +1
Query: 796 PPXHPXGWXPXHLXXPHHPPXPXPXPXPLTPXSPPXPPXQXXP-XTXRPPXPXPAS 960
PP P P P P P P +P S P P + P + PP PA+
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAA 179
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 28.7 bits (61), Expect = 1.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 953 GXGXGGRXVXGXXWXGGXGGEXGVRGXGXGXGXGGWWG 840
G GGR G GG G RG G G GG G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGG 49
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 27.9 bits (59), Expect = 2.7
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 4/55 (7%)
Frame = +1
Query: 796 PPXHPXGWXPXHLXXPHHPPXP----XPXPXPLTPXSPPXPPXQXXPXTXRPPXP 948
PP P H PHHPP P P P S P P P P P
Sbjct: 161 PPFPPTQHHHPHTRPPHHPPHPHFHNNNYPPPYCFQS-PVSPGATVPLQHHSPYP 214
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,337,053
Number of Sequences: 5004
Number of extensions: 13558
Number of successful extensions: 142
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 583709326
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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