Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_J13
(862 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.069
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 32 0.12
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.37
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.85
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.85
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.5
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 27 2.6
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 27 3.4
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 3.4
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 4.5
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 4.5
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 4.5
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 6.0
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.7 bits (71), Expect = 0.069
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = +2
Query: 674 PPPXXPXKXSPPXSKXGQPPXXXXXXXGFPPXNPPPXXPXXPXPPXXXXPXXPXP 838
PP P PP + P G PP PP P P P P P P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP-TPSAGLPPVPVP 1232
Score = 29.9 bits (64), Expect = 0.49
Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = +2
Query: 674 PPPXXPXKXSPPXS--KXGQPPXXXXXXXGFPPXNPPPXXPXXPXPPXXXXPXXP 832
PP P +PP G PP G PP PP P P P P P
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAA-GVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 26.2 bits (55), Expect = 6.0
Identities = 11/34 (32%), Positives = 13/34 (38%)
Frame = +3
Query: 672 PPPXXXLPKXPPPXQRXANPPXXXXXPXXSPPXT 773
P P +P PPP + P P PP T
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPST 1215
Score = 25.8 bits (54), Expect = 7.9
Identities = 22/97 (22%), Positives = 23/97 (23%)
Frame = +2
Query: 548 PXGEXXFPXKSGXXPEKXFXXXGPXXAXTXKXAXWXGFXQRPPPPXXPXKXSPPXSKXGQ 727
P G P SG P P PP P +PP
Sbjct: 1079 PSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSG 1138
Query: 728 PPXXXXXXXGFPPXNPPPXXPXXPXPPXXXXPXXPXP 838
P PP P P P P P P P
Sbjct: 1139 APPVPKPSVAAPPVPAPSGAPPVP-KPSVAAPPVPAP 1174
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.9 bits (69), Expect = 0.12
Identities = 22/63 (34%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Frame = -1
Query: 856 GPXXXKGXRXXXXXGXXGG-GXXGGGXGGVXGGEXXGXXXXXGGLAXL*XGGGXFGRXXX 680
G +G G GG G GGG GG GG G GG GG GR
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGG-----RGGARGGRGGS 60
Query: 679 GGG 671
GG
Sbjct: 61 SGG 63
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.37
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +2
Query: 668 RPPPPXXPXKXSPPXSKXGQPPXXXXXXXGFPPXNPPPXXPXXPXPPXXXXPXXP 832
RPP P PP S PP P PPP P P P P
Sbjct: 138 RPPTSAPPRPSIPPPSPASAPPIPSKAPP-IPSSLPPPAQPAAPVKSPPSAPSLP 191
Score = 25.8 bits (54), Expect = 7.9
Identities = 14/50 (28%), Positives = 15/50 (30%)
Frame = +3
Query: 618 PKXPXPXKXPVGXXFXKGPPPXXXLPKXPPPXQRXANPPXXXXXPXXSPP 767
P P P K PP LP P +PP P PP
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPP 196
Score = 25.8 bits (54), Expect = 7.9
Identities = 20/62 (32%), Positives = 21/62 (33%), Gaps = 11/62 (17%)
Frame = +2
Query: 671 PPP-----PXXPXKXSPPXSKXGQPPXXXXXXXGFPPXNP------PPXXPXXPXPPXXX 817
PPP P P K +PP PP PP P PP P P PP
Sbjct: 150 PPPSPASAPPIPSK-APPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQ 208
Query: 818 XP 823
P
Sbjct: 209 AP 210
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.1 bits (62), Expect = 0.85
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 760 PPXKPPPXXPPXPXPPXXXXXXPPSP 837
PP PPP PP P PP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.9 bits (59), Expect = 2.0
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 751 PXXPPXKPPPXXPPXPXPP 807
P PP PP PP P PP
Sbjct: 12 PPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 4.5
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 772 PPPXXPPXPXPPXXXXXXPPSPP 840
PP PP P PP P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.1 bits (62), Expect = 0.85
Identities = 15/52 (28%), Positives = 17/52 (32%)
Frame = +2
Query: 668 RPPPPXXPXKXSPPXSKXGQPPXXXXXXXGFPPXNPPPXXPXXPXPPXXXXP 823
+ PPP P P + P G PP PPP PP P
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 29.1 bits (62), Expect = 0.85
Identities = 15/51 (29%), Positives = 17/51 (33%)
Frame = +2
Query: 671 PPPPXXPXKXSPPXSKXGQPPXXXXXXXGFPPXNPPPXXPXXPXPPXXXXP 823
PPPP +P + PP PP PP P PP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.1 bits (62), Expect = 0.85
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 751 PXXPPXKPPPXXPPXPXPPXXXXXXPPSPP 840
P PP PP P PP PP PP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/54 (27%), Positives = 17/54 (31%)
Frame = +2
Query: 677 PPXXPXKXSPPXSKXGQPPXXXXXXXGFPPXNPPPXXPXXPXPPXXXXPXXPXP 838
PP P +PP PP PP + PP P P P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVP--PPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 27.9 bits (59), Expect = 2.0
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +2
Query: 665 QRPPPPXXPXKXSPPXSKXGQPPXXXXXXXGFPPXNPPPXXPXXPXP 805
Q PP PP PP PP PPP P P
Sbjct: 1695 QSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +1
Query: 772 PPPXXPPXPXPPXXXXXXPPSPPXXXXG 855
PP P P PP PPS P G
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAG 1726
Score = 26.6 bits (56), Expect = 4.5
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 751 PXXPPXKPPPXXPPXPXPPXXXXXXPPSPP 840
P PP PP PP P P P +PP
Sbjct: 1705 PTPPP--PPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +1
Query: 763 PXKPPPXXPPXPXPPXXXXXXPPSPP 840
P PP P PP PP PP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPP 1711
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 1/28 (3%)
Frame = +1
Query: 760 PPXKPP-PXXPPXPXPPXXXXXXPPSPP 840
PP PP P PP PP PS P
Sbjct: 1717 PPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 27.5 bits (58), Expect = 2.6
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = -1
Query: 805 GGGXXGGGXGGVXGGEXXGXXXXXGGLAXL*XGG---GXFGRXXXGGG 671
GGG GGG GG+ G + GG GG G F GGG
Sbjct: 135 GGGGMGGGMGGMGGMD--DDMDMDGGFGTRTRGGGMPGGFANMFGGGG 180
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 27.1 bits (57), Expect = 3.4
Identities = 14/46 (30%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = +2
Query: 674 PPPXXPXKXSPPXSKXGQPPXXXXXXXGFPPXNPP-PXXPXXPXPP 808
PPP P + PP + PP +PP P P P P
Sbjct: 206 PPPPPPQQNYPPAASSSAPP-MQYQQTAYPPQQAPYPPVQAYPQAP 250
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.1 bits (57), Expect = 3.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 814 GXXGGGXXGGGXGGVXGGEXXG 749
G GGG GG GG GG G
Sbjct: 168 GGFGGGSRGGSRGGFRGGSRGG 189
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/57 (24%), Positives = 16/57 (28%)
Frame = +2
Query: 671 PPPPXXPXKXSPPXSKXGQPPXXXXXXXGFPPXNPPPXXPXXPXPPXXXXPXXPXPL 841
PPPP P + +P P PP P P P P L
Sbjct: 190 PPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPPTL 246
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 26.6 bits (56), Expect = 4.5
Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 3/57 (5%)
Frame = -2
Query: 831 GXXGXXXXGGXGXXGXXGGGF--XGGXPXXXXXXXGGWPXFXXG-GXFLXGXXGGGG 670
G G GG G G GG GG P GG+ G G L G GG G
Sbjct: 203 GPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPG 259
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 26.6 bits (56), Expect = 4.5
Identities = 17/56 (30%), Positives = 19/56 (33%)
Frame = +2
Query: 674 PPPXXPXKXSPPXSKXGQPPXXXXXXXGFPPXNPPPXXPXXPXPPXXXXPXXPXPL 841
PPP P + +P PP PP PP P P P P P L
Sbjct: 391 PPPAIPGRSAPAL-----PPLGNASRTSTPPVPTPPSLP--PSAPPSLPPSAPPSL 439
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 760 PPXKPPPXXPPXPXPPXXXXXXPPSPP 840
PP PP PP PP PPS P
Sbjct: 415 PPVPTPPSLPPSA-PPSLPPSAPPSLP 440
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.2 bits (55), Expect = 6.0
Identities = 12/31 (38%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Frame = +1
Query: 751 PXXP-PXKPPPXXPPXPXPPXXXXXXPPSPP 840
P P P +P P PP P P P PP
Sbjct: 110 PNEPVPEEPLPGEPPLPDEPVPEEPLPGEPP 140
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +1
Query: 763 PXKPPPXXPPXPXPPXXXXXXPPSPP 840
P +P P PP P P P PP
Sbjct: 99 PEEPLPREPPLPNEPVPEEPLPGEPP 124
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,370,626
Number of Sequences: 5004
Number of extensions: 16017
Number of successful extensions: 201
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 125
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 428468660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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