Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_J07
         (828 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82077-3|CAB63331.1|  122|Caenorhabditis elegans Hypothetical pr...    98   6e-21
Z82077-4|CAB63332.1|   70|Caenorhabditis elegans Hypothetical pr...    67   1e-11

>Z82077-3|CAB63331.1|  122|Caenorhabditis elegans Hypothetical
           protein W09C5.6a protein.
          Length = 122

 Score = 98.3 bits (234), Expect = 6e-21
 Identities = 46/104 (44%), Positives = 62/104 (59%)
 Frame = +1

Query: 61  RXXTVXLXXRLHGVGFKKRAPXAXKXIRKFAEKQXGTPDIRVXTRLNKFLWSKGVRNVPF 240
           R  T+ +  R+ G+G KKRAP A   I+KFA+ Q  T D+RV T+LNKF+WSKG++NVP+
Sbjct: 19  REYTIHIHARIRGIGSKKRAPRAIDEIKKFAKIQMKTNDVRVDTKLNKFIWSKGIKNVPY 78

Query: 241 XXXXXXXXXXXXXXXXAHKLFTLVTYVPVASIKGLQTENVDASQ 372
                           A KL+TL TYVP  +  GL   NVD+ +
Sbjct: 79  RVRVRLSRRRNEDEDSAQKLYTLCTYVPCTNFHGLTNVNVDSEE 122


>Z82077-4|CAB63332.1|   70|Caenorhabditis elegans Hypothetical
           protein W09C5.6b protein.
          Length = 70

 Score = 67.3 bits (157), Expect = 1e-11
 Identities = 30/68 (44%), Positives = 40/68 (58%)
 Frame = +1

Query: 169 TPDIRVXTRLNKFLWSKGVRNVPFXXXXXXXXXXXXXXXXAHKLFTLVTYVPVASIKGLQ 348
           T D+RV T+LNKF+WSKG++NVP+                A KL+TL TYVP  +  GL 
Sbjct: 3   TNDVRVDTKLNKFIWSKGIKNVPYRVRVRLSRRRNEDEDSAQKLYTLCTYVPCTNFHGLT 62

Query: 349 TENVDASQ 372
             NVD+ +
Sbjct: 63  NVNVDSEE 70


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,225,304
Number of Sequences: 27780
Number of extensions: 95349
Number of successful extensions: 173
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)