Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_J05
         (874 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC043595-1|AAH43595.1|  541|Homo sapiens RFT1 homolog (S. cerevi...    81   7e-15
AJ318099-1|CAC69544.1|  541|Homo sapiens putative endoplasmic re...    81   7e-15
BC130559-1|AAI30560.1|   99|Homo sapiens similar to CG14977-PA p...    74   6e-13
BC130553-1|AAI30554.1|   99|Homo sapiens similar to CG14977-PA p...    74   6e-13
BC105609-1|AAI05610.1|   99|Homo sapiens similar to CG14977-PA p...    74   6e-13
BC063401-1|AAH63401.1|   99|Homo sapiens similar to CG14977-PA p...    74   6e-13

>BC043595-1|AAH43595.1|  541|Homo sapiens RFT1 homolog (S.
           cerevisiae) protein.
          Length = 541

 Score = 80.6 bits (190), Expect = 7e-15
 Identities = 37/90 (41%), Positives = 56/90 (62%)
 Frame = +1

Query: 481 ARNILMSSLENASFNILIQILFRCITFXINAWVIRNVGHEILGIMNVRXXXXXSTILFLX 660
           ++ +L  +   AS  +L+Q+LFR ITF +NA+++R +  EI+G++NVR     ST LFL 
Sbjct: 3   SQEVLGHAARLASSGLLLQVLFRLITFVLNAFILRFLSKEIVGVVNVRLTLLYSTTLFLA 62

Query: 661 REPFNRACLXRTDGFGWXHLINXIWLSXPI 750
           RE F RACL       W   +N +WL+ P+
Sbjct: 63  REAFRRACLSGGTQRDWSQTLNLLWLTVPL 92


>AJ318099-1|CAC69544.1|  541|Homo sapiens putative endoplasmic
           reticulum multispan transmembrane protein protein.
          Length = 541

 Score = 80.6 bits (190), Expect = 7e-15
 Identities = 37/90 (41%), Positives = 56/90 (62%)
 Frame = +1

Query: 481 ARNILMSSLENASFNILIQILFRCITFXINAWVIRNVGHEILGIMNVRXXXXXSTILFLX 660
           ++ +L  +   AS  +L+Q+LFR ITF +NA+++R +  EI+G++NVR     ST LFL 
Sbjct: 3   SQEVLGHAARLASSGLLLQVLFRLITFVLNAFILRFLSKEIVGVVNVRLTLLYSTTLFLA 62

Query: 661 REPFNRACLXRTDGFGWXHLINXIWLSXPI 750
           RE F RACL       W   +N +WL+ P+
Sbjct: 63  REAFRRACLSGGTQRDWSQTLNLLWLTVPL 92


>BC130559-1|AAI30560.1|   99|Homo sapiens similar to CG14977-PA
           protein.
          Length = 99

 Score = 74.1 bits (174), Expect = 6e-13
 Identities = 36/83 (43%), Positives = 61/83 (73%)
 Frame = +2

Query: 167 MDKIPDQIGYLVLTEDGAVLESGGELENDERIATIITDLITLSNEVDSVAFGPSENFKKI 346
           +++IPDQ+GYLVL+E GAVL S G+LENDE+ A+ I++L++ +     +  G +  FK++
Sbjct: 9   LERIPDQLGYLVLSE-GAVLASSGDLENDEQAASAISELVSTACGF-RLHRGMNVPFKRL 66

Query: 347 SITFDDHWYIVCLSNKKIYVVKR 415
           S+ F +H  +V +S ++++VVKR
Sbjct: 67  SVVFGEHTLLVTVSGQRVFVVKR 89


>BC130553-1|AAI30554.1|   99|Homo sapiens similar to CG14977-PA
           protein.
          Length = 99

 Score = 74.1 bits (174), Expect = 6e-13
 Identities = 36/83 (43%), Positives = 61/83 (73%)
 Frame = +2

Query: 167 MDKIPDQIGYLVLTEDGAVLESGGELENDERIATIITDLITLSNEVDSVAFGPSENFKKI 346
           +++IPDQ+GYLVL+E GAVL S G+LENDE+ A+ I++L++ +     +  G +  FK++
Sbjct: 9   LERIPDQLGYLVLSE-GAVLASSGDLENDEQAASAISELVSTACGF-RLHRGMNVPFKRL 66

Query: 347 SITFDDHWYIVCLSNKKIYVVKR 415
           S+ F +H  +V +S ++++VVKR
Sbjct: 67  SVVFGEHTLLVTVSGQRVFVVKR 89


>BC105609-1|AAI05610.1|   99|Homo sapiens similar to CG14977-PA
           protein.
          Length = 99

 Score = 74.1 bits (174), Expect = 6e-13
 Identities = 36/83 (43%), Positives = 61/83 (73%)
 Frame = +2

Query: 167 MDKIPDQIGYLVLTEDGAVLESGGELENDERIATIITDLITLSNEVDSVAFGPSENFKKI 346
           +++IPDQ+GYLVL+E GAVL S G+LENDE+ A+ I++L++ +     +  G +  FK++
Sbjct: 9   LERIPDQLGYLVLSE-GAVLASSGDLENDEQAASAISELVSTACGF-RLHRGMNVPFKRL 66

Query: 347 SITFDDHWYIVCLSNKKIYVVKR 415
           S+ F +H  +V +S ++++VVKR
Sbjct: 67  SVVFGEHTLLVTVSGQRVFVVKR 89


>BC063401-1|AAH63401.1|   99|Homo sapiens similar to CG14977-PA
           protein.
          Length = 99

 Score = 74.1 bits (174), Expect = 6e-13
 Identities = 36/83 (43%), Positives = 61/83 (73%)
 Frame = +2

Query: 167 MDKIPDQIGYLVLTEDGAVLESGGELENDERIATIITDLITLSNEVDSVAFGPSENFKKI 346
           +++IPDQ+GYLVL+E GAVL S G+LENDE+ A+ I++L++ +     +  G +  FK++
Sbjct: 9   LERIPDQLGYLVLSE-GAVLASSGDLENDEQAASAISELVSTACGF-RLHRGMNVPFKRL 66

Query: 347 SITFDDHWYIVCLSNKKIYVVKR 415
           S+ F +H  +V +S ++++VVKR
Sbjct: 67  SVVFGEHTLLVTVSGQRVFVVKR 89


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,828,328
Number of Sequences: 237096
Number of extensions: 1819841
Number of successful extensions: 2153
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2145
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)