Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_J02
(871 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.81
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.81
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.81
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.1
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 1.9
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 29 4.3
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 28 7.5
Z66499-6|CAA91299.2| 765|Caenorhabditis elegans Hypothetical pr... 28 10.0
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 10.0
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 28 10.0
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 0.81
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 580 PPPXXXPPXXXXPXKXPPPPXGXXXG 657
PPP PP P PPPP G G
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 583 PPXXXPPXXXXPXKXPPPPXGXXXGG 660
PP PP P PPPP G GG
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 580 PPPXXXPPXXXXPXKXPPPPXG 645
PPP PP P PPPP G
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGG 767
Score = 27.9 bits (59), Expect = 10.0
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = +2
Query: 581 PPPXXXPXXXXPXKKXPPPPGGXXXGGXKKKKNXXXPPPXXXKKXXSXPP 730
PPP P P PPPP GG PPP K PP
Sbjct: 742 PPPPPPPGGLPPISGGPPPP-PPPPGGCPPP--PPPPPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 0.81
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 580 PPPXXXPPXXXXPXKXPPPPXGXXXG 657
PPP PP P PPPP G G
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 583 PPXXXPPXXXXPXKXPPPPXGXXXGG 660
PP PP P PPPP G GG
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 580 PPPXXXPPXXXXPXKXPPPPXG 645
PPP PP P PPPP G
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGG 767
Score = 27.9 bits (59), Expect = 10.0
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = +2
Query: 581 PPPXXXPXXXXPXKKXPPPPGGXXXGGXKKKKNXXXPPPXXXKKXXSXPP 730
PPP P P PPPP GG PPP K PP
Sbjct: 742 PPPPPPPGGLPPISGGPPPP-PPPPGGCPPP--PPPPPPGGFKGGPPPPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 0.81
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 580 PPPXXXPPXXXXPXKXPPPPXGXXXG 657
PPP PP P PPPP G G
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGFKGG 366
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 583 PPXXXPPXXXXPXKXPPPPXGXXXGG 660
PP PP P PPPP G GG
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGFKGG 366
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 580 PPPXXXPPXXXXPXKXPPPPXG 645
PPP PP P PPPP G
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGG 350
Score = 27.9 bits (59), Expect = 10.0
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = +2
Query: 581 PPPXXXPXXXXPXKKXPPPPGGXXXGGXKKKKNXXXPPPXXXKKXXSXPP 730
PPP P P PPPP GG PPP K PP
Sbjct: 325 PPPPPPPGGLPPISGGPPPP-PPPPGGCPPP--PPPPPPGGFKGGPPPPP 371
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +2
Query: 581 PPPXXXPXXXXPXKKXPPPPGGXXXGGXKKKKNXXXPPPXXXKKXXSXPP 730
PPP P PPPP G + PPP S PP
Sbjct: 265 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
Score = 27.9 bits (59), Expect = 10.0
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +2
Query: 581 PPPXXXPXXXXPXKKXPPPPGGXXXGGXKKKKNXXXPPPXXXKK--XXSXPPXG 736
PPP P P PPP G G PPP K+ PP G
Sbjct: 297 PPPPPPPRGSPPTGSLPPPQAG---GSPPPAGTGSPPPPPRQKRQAPERSPPTG 347
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +2
Query: 581 PPPXXXPXXXXPXKKXPPPPGGXXXGGXKKKKNXXXPPPXXXKKXXSXPP 730
PPP P PPPP G + PPP S PP
Sbjct: 286 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
Score = 27.9 bits (59), Expect = 10.0
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +2
Query: 581 PPPXXXPXXXXPXKKXPPPPGGXXXGGXKKKKNXXXPPPXXXKK--XXSXPPXG 736
PPP P P PPP G G PPP K+ PP G
Sbjct: 318 PPPPPPPRGSPPTGSLPPPQAG---GSPPPAGTGSPPPPPRQKRQAPERSPPTG 368
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +2
Query: 581 PPPXXXPXXXXPXKKXPPPPGGXXXGGXKKKKNXXXPPPXXXKKXXSXPP 730
PPP P PPPP G + PPP S PP
Sbjct: 271 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
Score = 27.9 bits (59), Expect = 10.0
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +2
Query: 581 PPPXXXPXXXXPXKKXPPPPGGXXXGGXKKKKNXXXPPPXXXKK--XXSXPPXG 736
PPP P P PPP G G PPP K+ PP G
Sbjct: 303 PPPPPPPRGSPPTGSLPPPQAG---GSPPPAGTGSPPPPPRQKRQAPERSPPTG 353
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 580 PPPXXXPPXXXXPXKXPPPPXG 645
PPP PP P PPPP G
Sbjct: 577 PPPPPPPPMLGGPPPPPPPPGG 598
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 580 PPPXXXPPXXXXPXKXPPPPXGXXXG 657
PPP PP PPPP G G
Sbjct: 576 PPPPPPPPPMLGGPPPPPPPPGGLMG 601
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 580 PPPXXXPPXXXXPXKXPPPP 639
PPP PP P + PPPP
Sbjct: 476 PPPPPPPPPENEPEEFPPPP 495
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 580 PPPXXXPPXXXXPXKXPPPP 639
PPP PP P PPPP
Sbjct: 66 PPPPICPPPPPPPMPCPPPP 85
>Z66499-6|CAA91299.2| 765|Caenorhabditis elegans Hypothetical
protein T01B7.6 protein.
Length = 765
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 580 PPPXXXPPXXXXPXKXPPPP 639
PPP PP P PPPP
Sbjct: 511 PPPGFVPPGLVAPPGLPPPP 530
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 580 PPPXXXPPXXXXPXKXPPP 636
PPP PP P K PPP
Sbjct: 727 PPPQGIPPMGFDPNKPPPP 745
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 27.9 bits (59), Expect = 10.0
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -3
Query: 695 GXGXKXFFFFXPPPXXXPXGGGGXFXGXXXXGGXXXGGG 579
G G + PP GGGG F GG GGG
Sbjct: 303 GPGTDAAYCPCPPRTPAGGGGGGDFPAGGGGGGYSTGGG 341
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,435,736
Number of Sequences: 27780
Number of extensions: 224111
Number of successful extensions: 1333
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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