Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_I24
(900 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0084 + 562119-562411,562854-562902,563151-563162,563194-56... 44 2e-04
10_08_0817 - 20792817-20793360,20794061-20794156,20795193-20795296 43 3e-04
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 37 0.019
05_01_0148 - 985745-986180,986290-986385,986498-986694,986824-98... 37 0.025
03_02_0609 - 9823120-9823573,9823903-9824102,9824240-9824335,982... 37 0.025
08_01_0202 - 1638978-1639571 36 0.058
02_01_0158 - 1103461-1104186 33 0.23
12_02_0814 - 23410278-23411854,23411933-23412166,23412688-234127... 31 0.94
09_06_0087 + 20771329-20771450,20771462-20771771,20771893-207726... 31 0.94
05_01_0455 - 3614011-3614503,3615007-3615072,3615154-3615347,361... 31 0.94
11_05_0050 + 18665251-18665613,18667280-18667744,18668548-186690... 29 3.8
03_06_0587 - 34921535-34922041,34922579-34922689 29 3.8
02_03_0321 - 17683766-17683834,17685085-17685150,17685568-176856... 29 3.8
03_06_0481 - 34222012-34222287,34222371-34222439 29 5.0
12_02_0792 - 23191120-23191313,23191419-23191775,23192027-231921... 29 6.7
06_01_0789 - 5901888-5902940,5903685-5903824,5904606-5904665,590... 28 8.8
04_03_0114 + 11417041-11417188,11418325-11418399,11421007-114211... 28 8.8
02_05_1020 - 33561454-33561568,33561839-33562070,33563286-335633... 28 8.8
>05_01_0084 + 562119-562411,562854-562902,563151-563162,563194-563327,
563716-566278
Length = 1016
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = +3
Query: 417 FKCNXTGHFXRDCKEEXD---XXYRCNXTGHIAXE-XAQSPDEPSCYNXNKXGHIXRNCP 584
+KC GH+ RDC + ++C GH + + QS C+ + GH R+CP
Sbjct: 927 YKCKQPGHYARDCPGQSTGGLECFKCKQPGHFSRDCPVQSTGGSECFKCKQPGHFARDCP 986
Query: 585 EGGXG 599
G
Sbjct: 987 GQSTG 991
>10_08_0817 - 20792817-20793360,20794061-20794156,20795193-20795296
Length = 247
Score = 43.2 bits (97), Expect = 3e-04
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +3
Query: 423 CNXTGHFXRDCKEEXDXXYRCNXTGHIAXEXAQSPDEPSCYNXNKXGHIXRNCPEGG 593
C GHF RDC + C GHIA E + + C+N + GH+ +CP G
Sbjct: 44 CKRPGHFARDCPNVA-LCHACGLPGHIAAECSS---KDLCWNCKEPGHMANSCPNEG 96
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Frame = +3
Query: 423 CNXTGHFXRDCKE------EXDXXYRCNXTGHIAXEXAQSPDEPSCYNXNKXGHIXRNCP 584
C +GH R+C E C GH+A A+ +E +C N K GH+ RNCP
Sbjct: 101 CGKSGHIARECSAPPMLPGEMRLCSNCYKPGHLA---AECTNEKACNNCRKSGHLARNCP 157
Score = 40.7 bits (91), Expect = 0.002
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +3
Query: 423 CNXTGHFXRDCKEEXDXXYRCNXTGHIAXEXAQSPDEPSCYNXNKXGHIXRNC 581
C GH +C + D + C GH+A P+E C N K GHI R C
Sbjct: 63 CGLPGHIAAECSSK-DLCWNCKEPGHMANSC---PNEGICRNCGKSGHIAREC 111
Score = 39.9 bits (89), Expect = 0.003
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +3
Query: 423 CNXTGHFXRDCKEEXDXXYRCNXTGHIAXEXAQSPDEPSCYNXNKXGHIXRNCPE 587
C GH +C E C +GH+A P+EP C N GH+ R CP+
Sbjct: 127 CYKPGHLAAECTNEKACN-NCRKSGHLARNC---PNEPVCNLCNVSGHLARECPK 177
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 423 CNXTGHFXRDCKEEXDXXYRCNXTGHIAXEXAQS 524
C +GH R+C E CN +GH+A E +S
Sbjct: 146 CRKSGHLARNCPNEPVCNL-CNVSGHLARECPKS 178
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 37.1 bits (82), Expect = 0.019
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 10/70 (14%)
Frame = +3
Query: 423 CNXTGHFXRDCKEEXDXX-----YRCNXTGHIAXEXAQSPDE-----PSCYNXNKXGHIX 572
C GH ++C ++ D Y C +GH + + + SC+ + GH+
Sbjct: 100 CRQRGHSLKNCPDKNDENLKKFCYNCGESGHSLSKCPKPIENGGTKFASCFVCKQQGHLS 159
Query: 573 RNCPEGGXGV 602
+NCPE G+
Sbjct: 160 KNCPENKHGI 169
>05_01_0148 -
985745-986180,986290-986385,986498-986694,986824-986919,
987020-987059,987751-987857
Length = 323
Score = 36.7 bits (81), Expect = 0.025
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +3
Query: 411 KXFKCNXTGHFXRDCK--EEXDXXYRCNXTGHIAXEXAQSP 527
+ F C GH+ RDCK + + YRC GHI SP
Sbjct: 103 RCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP 143
Score = 31.9 bits (69), Expect = 0.71
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 477 YRCNXTGHIAXEXAQSPDEPSCYNXNKXGHIXRNC 581
+ C GH A + + CY + GHI RNC
Sbjct: 105 FNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 139
>03_02_0609 -
9823120-9823573,9823903-9824102,9824240-9824335,
9824454-9824567,9824711-9824774,9825206-9825312
Length = 344
Score = 36.7 bits (81), Expect = 0.025
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +3
Query: 411 KXFKCNXTGHFXRDCK--EEXDXXYRCNXTGHIAXEXAQSP 527
+ F C GH+ RDCK + + YRC GHI SP
Sbjct: 150 RCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSP 190
Score = 31.9 bits (69), Expect = 0.71
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 477 YRCNXTGHIAXEXAQSPDEPSCYNXNKXGHIXRNC 581
+ C GH A + + CY + GHI RNC
Sbjct: 152 FNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC 186
>08_01_0202 - 1638978-1639571
Length = 197
Score = 35.5 bits (78), Expect = 0.058
Identities = 17/56 (30%), Positives = 20/56 (35%)
Frame = +3
Query: 417 FKCNXTGHFXRDCKEEXDXXYRCNXTGHIAXEXAQSPDEPSCYNXNKXGHIXRNCP 584
+KC GH RDC + G CYN + GHI R CP
Sbjct: 138 YKCGEEGHMARDCSQGGGGGGGYGGGGGGYRGGGGGGGGGGCYNCGETGHIARECP 193
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 308 SSXXYKXNRTGHFAXXCTQGGRGVAGF 388
S YK GH A C+QGG G G+
Sbjct: 134 SRACYKCGEEGHMARDCSQGGGGGGGY 160
Score = 29.5 bits (63), Expect = 3.8
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 537 SCYNXNKXGHIXRNCPEGGXG 599
+CY + GH+ R+C +GG G
Sbjct: 136 ACYKCGEEGHMARDCSQGGGG 156
>02_01_0158 - 1103461-1104186
Length = 241
Score = 33.5 bits (73), Expect = 0.23
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = +3
Query: 417 FKCNXTGHFXRDCKEEXDXXYRCNXTGHIAXEXAQSPDEPSCYNXNKXGHIXRNCPEGGX 596
FKC GH RDC +G +CYN + GH+ R+C GG
Sbjct: 162 FKCGEMGHMARDCFN----------SGGGGGGGGGGGGGGACYNCGETGHLARDCYNGGG 211
Query: 597 G 599
G
Sbjct: 212 G 212
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/61 (26%), Positives = 22/61 (36%)
Frame = +3
Query: 417 FKCNXTGHFXRDCKEEXDXXYRCNXTGHIAXEXAQSPDEPSCYNXNKXGHIXRNCPEGGX 596
FKC +GH RDC + G C+ + GH+ R+C G
Sbjct: 127 FKCGESGHMARDC-------FNGGGVGVGGGGGGGGGAGGGCFKCGEMGHMARDCFNSGG 179
Query: 597 G 599
G
Sbjct: 180 G 180
>12_02_0814 -
23410278-23411854,23411933-23412166,23412688-23412725,
23412872-23412948
Length = 641
Score = 31.5 bits (68), Expect = 0.94
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3
Query: 477 YRCNXTGHIAXEXAQSPDEPSCYNXNKXGHIXRNCP 584
+ C GH + + P CYN GHI RNCP
Sbjct: 133 FNCLGLGH---QKSACPGSTRCYNCWYSGHIARNCP 165
>09_06_0087 +
20771329-20771450,20771462-20771771,20771893-20772672,
20772854-20774002
Length = 786
Score = 31.5 bits (68), Expect = 0.94
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 477 YRCNXTGHIAXEXAQSPDEPSCYNXNKXGHIXRNC 581
+RC GH+ +Q P +CY GHI RNC
Sbjct: 72 FRCLGLGHLKASCSQPP---TCYRCWYPGHIERNC 103
>05_01_0455 -
3614011-3614503,3615007-3615072,3615154-3615347,
3615562-3615657,3615790-3615829,3616729-3616856
Length = 338
Score = 31.5 bits (68), Expect = 0.94
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +3
Query: 417 FKCNXTGHFXRDCK--EEXDXXYRCNXTGHIAXEXAQSPDE 533
F C GH+ R+C + + Y C GHI E SP +
Sbjct: 111 FNCGMEGHWHRNCTAGDWTNRCYGCGERGHILRECKNSPKD 151
>11_05_0050 +
18665251-18665613,18667280-18667744,18668548-18669037,
18669115-18669143
Length = 448
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Frame = +3
Query: 477 YRCNXTGHIAX---EXAQSPDEPSCYNXNKXGH 566
YRC GH + + A SP CYN K GH
Sbjct: 405 YRCGEDGHWSRNCPKPASSPLNSPCYNCGKLGH 437
>03_06_0587 - 34921535-34922041,34922579-34922689
Length = 205
Score = 29.5 bits (63), Expect = 3.8
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 540 CYNXNKXGHIXRNCPEGGXG 599
CY K GH R CP G G
Sbjct: 128 CYKCGKPGHFARECPSGDGG 147
>02_03_0321 -
17683766-17683834,17685085-17685150,17685568-17685633,
17685827-17685897,17688035-17688053,17688405-17688687,
17688775-17688945,17689060-17689431,17689629-17689669,
17690112-17690365,17691185-17691263,17691390-17691950
Length = 683
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 516 AQSPDEPSCYNXNKXGHIXRNCP 584
A D +CYN K GH NCP
Sbjct: 133 ASRNDNVACYNCGKKGHYSPNCP 155
>03_06_0481 - 34222012-34222287,34222371-34222439
Length = 114
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 495 GHIAXEXAQSPDEPSCYNXNKXGHIXRNC 581
GHIA E +EP C N GH+ RNC
Sbjct: 25 GHIARECT---NEPVCNLCNVSGHLARNC 50
>12_02_0792 - 23191120-23191313,23191419-23191775,23192027-23192108,
23192186-23193097,23193190-23193346,23193540-23193694,
23194667-23194819,23195334-23195627,23195711-23195896,
23196062-23196662,23196868-23196992,23197101-23197197,
23197299-23197411,23198129-23198233
Length = 1176
Score = 28.7 bits (61), Expect = 6.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 540 CYNXNKXGHIXRNCPE 587
CY K GH+ R+CPE
Sbjct: 1002 CYKCKKSGHLSRDCPE 1017
>06_01_0789 -
5901888-5902940,5903685-5903824,5904606-5904665,
5904794-5904854
Length = 437
Score = 28.3 bits (60), Expect = 8.8
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3
Query: 540 CYNXNKXGHIXRNCP 584
CY ++ GHI RNCP
Sbjct: 236 CYKCHEFGHIRRNCP 250
>04_03_0114 +
11417041-11417188,11418325-11418399,11421007-11421107,
11422049-11422120,11422239-11422757,11422949-11423149
Length = 371
Score = 28.3 bits (60), Expect = 8.8
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3
Query: 540 CYNXNKXGHIXRNCP 584
CY ++ GHI RNCP
Sbjct: 244 CYKCHEFGHIRRNCP 258
>02_05_1020 -
33561454-33561568,33561839-33562070,33563286-33563374,
33563856-33563944
Length = 174
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 342 ISRXNARRGAVVSRDSXFNXQXEKXFKCNXTGHFXRDCK 458
+SR ++ RG RD + K ++C TGHF R+C+
Sbjct: 68 LSRNSSSRGG---RDRHGGSEM-KCYECGETGHFARECR 102
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,185,973
Number of Sequences: 37544
Number of extensions: 103847
Number of successful extensions: 467
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 451
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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