Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_I19
         (932 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC029067-1|AAH29067.1|   65|Homo sapiens chromosome 13 open read...    72   3e-12
AL138960-2|CAI12995.1|   65|Homo sapiens RP11-269C23.1 protein.        72   3e-12
CR533472-1|CAG38503.1|   66|Homo sapiens SERP1 protein.                61   5e-09
BC112365-1|AAI12366.1|   66|Homo sapiens stress-associated endop...    61   5e-09
BC112364-1|AAI12365.1|   66|Homo sapiens stress-associated endop...    61   5e-09
BC108314-1|AAI08315.1|   66|Homo sapiens stress-associated endop...    61   5e-09
AF136975-1|AAG49436.1|   66|Homo sapiens ribosome attached membr...    61   5e-09
AB022427-1|BAA81895.1|   66|Homo sapiens SERP1 protein.                61   5e-09

>BC029067-1|AAH29067.1|   65|Homo sapiens chromosome 13 open reading
           frame 21 protein.
          Length = 65

 Score = 71.7 bits (168), Expect = 3e-12
 Identities = 31/48 (64%), Positives = 39/48 (81%)
 Frame = +2

Query: 188 KNITMRGNVPKTTKEKEDQYPVAPXVLDLFIFXXCGSAVFQIIQSIRL 331
           KNIT RGNV KT + +E++YPV P +L LF+F  CGSA+FQIIQSIR+
Sbjct: 16  KNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRM 63


>AL138960-2|CAI12995.1|   65|Homo sapiens RP11-269C23.1 protein.
          Length = 65

 Score = 71.7 bits (168), Expect = 3e-12
 Identities = 31/48 (64%), Positives = 39/48 (81%)
 Frame = +2

Query: 188 KNITMRGNVPKTTKEKEDQYPVAPXVLDLFIFXXCGSAVFQIIQSIRL 331
           KNIT RGNV KT + +E++YPV P +L LF+F  CGSA+FQIIQSIR+
Sbjct: 16  KNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRM 63


>CR533472-1|CAG38503.1|   66|Homo sapiens SERP1 protein.
          Length = 66

 Score = 61.3 bits (142), Expect = 5e-09
 Identities = 30/49 (61%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
 Frame = +2

Query: 188 KNITMRGNVPKTTKEK-EDQYPVAPXVLDLFIFXXCGSAVFQIIQSIRL 331
           KNIT RGNV KT++   E++  V P +L LFIF  CGSA+FQIIQSIR+
Sbjct: 16  KNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIRM 64


>BC112365-1|AAI12366.1|   66|Homo sapiens stress-associated
           endoplasmic reticulum protein 1 protein.
          Length = 66

 Score = 61.3 bits (142), Expect = 5e-09
 Identities = 30/49 (61%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
 Frame = +2

Query: 188 KNITMRGNVPKTTKEK-EDQYPVAPXVLDLFIFXXCGSAVFQIIQSIRL 331
           KNIT RGNV KT++   E++  V P +L LFIF  CGSA+FQIIQSIR+
Sbjct: 16  KNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIRM 64


>BC112364-1|AAI12365.1|   66|Homo sapiens stress-associated
           endoplasmic reticulum protein 1 protein.
          Length = 66

 Score = 61.3 bits (142), Expect = 5e-09
 Identities = 30/49 (61%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
 Frame = +2

Query: 188 KNITMRGNVPKTTKEK-EDQYPVAPXVLDLFIFXXCGSAVFQIIQSIRL 331
           KNIT RGNV KT++   E++  V P +L LFIF  CGSA+FQIIQSIR+
Sbjct: 16  KNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIRM 64


>BC108314-1|AAI08315.1|   66|Homo sapiens stress-associated
           endoplasmic reticulum protein 1 protein.
          Length = 66

 Score = 61.3 bits (142), Expect = 5e-09
 Identities = 30/49 (61%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
 Frame = +2

Query: 188 KNITMRGNVPKTTKEK-EDQYPVAPXVLDLFIFXXCGSAVFQIIQSIRL 331
           KNIT RGNV KT++   E++  V P +L LFIF  CGSA+FQIIQSIR+
Sbjct: 16  KNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIRM 64


>AF136975-1|AAG49436.1|   66|Homo sapiens ribosome attached membrane
           protein 4 protein.
          Length = 66

 Score = 61.3 bits (142), Expect = 5e-09
 Identities = 30/49 (61%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
 Frame = +2

Query: 188 KNITMRGNVPKTTKEK-EDQYPVAPXVLDLFIFXXCGSAVFQIIQSIRL 331
           KNIT RGNV KT++   E++  V P +L LFIF  CGSA+FQIIQSIR+
Sbjct: 16  KNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIRM 64


>AB022427-1|BAA81895.1|   66|Homo sapiens SERP1 protein.
          Length = 66

 Score = 61.3 bits (142), Expect = 5e-09
 Identities = 30/49 (61%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
 Frame = +2

Query: 188 KNITMRGNVPKTTKEK-EDQYPVAPXVLDLFIFXXCGSAVFQIIQSIRL 331
           KNIT RGNV KT++   E++  V P +L LFIF  CGSA+FQIIQSIR+
Sbjct: 16  KNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIRM 64


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,316,171
Number of Sequences: 237096
Number of extensions: 1263395
Number of successful extensions: 5180
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4920
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12214492840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)