Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_I18
(887 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0875 + 32393496-32393881,32395297-32395397,32395493-323956... 97 2e-20
01_07_0363 - 43066250-43066303,43066304-43066411,43066500-430665... 34 0.17
02_05_0448 - 29100674-29100716,29100821-29100902,29101010-291011... 33 0.30
05_04_0447 + 21347786-21347974,21348104-21348169,21348266-213483... 30 2.8
04_04_1663 - 35156098-35156140,35156273-35156354,35156506-351565... 30 2.8
01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,804... 30 2.8
05_01_0108 - 709031-709204,709294-709359,709607-709714,709822-70... 29 3.7
05_05_0132 - 22611030-22611908,22612016-22612135,22612644-226128... 29 6.5
02_01_0791 - 5930553-5930802,5931042-5932351 29 6.5
>02_05_0875 +
32393496-32393881,32395297-32395397,32395493-32395674,
32396135-32396233,32396311-32396403
Length = 286
Score = 97.1 bits (231), Expect = 2e-20
Identities = 61/136 (44%), Positives = 84/136 (61%), Gaps = 2/136 (1%)
Frame = +3
Query: 102 RSIARRLCAVKEPTRVTCSINSTATLKT-QVRMYIVEERGSPYTPDYRVFFKDEGG-PIS 275
R AR AV+ RV + +TA L+T ++R +E+G P T DYRVF D GG +S
Sbjct: 24 RRTARLPTAVRFQRRV---LATTALLRTAELRP---KEQGLPETLDYRVFLVDGGGRKVS 77
Query: 276 PMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEALNPIKQDVKKGNLRFVNNVFPHR 455
P HD+PL A + + VVE+P+ ++AKME++ E+ PIKQD KKGNLR+ +P+
Sbjct: 78 PWHDVPLRAGDG--VFHFVVEIPKESSAKMEVATDESFTPIKQDTKKGNLRY----YPY- 130
Query: 456 GYIWNYGALPQTXENP 503
WNYG PQT E+P
Sbjct: 131 NINWNYGLFPQTWEDP 146
Score = 62.9 bits (146), Expect = 3e-10
Identities = 30/52 (57%), Positives = 35/52 (67%)
Frame = +1
Query: 526 GARGDNDPVDVIEIGERVASRGDVYPVKILGTLXLIDEXXTDWXLIXIDSRD 681
GA GDNDPVDV+EIGER A+ GDV VK L L +IDE DW ++ I D
Sbjct: 155 GAFGDNDPVDVVEIGERRANIGDVLKVKPLAALAMIDEGELDWKIVAISLDD 206
>01_07_0363 -
43066250-43066303,43066304-43066411,43066500-43066565,
43066787-43066815,43066993-43067131
Length = 131
Score = 33.9 bits (74), Expect = 0.17
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +3
Query: 276 PMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEALNPIKQDVKKGNLRFVNNVFPHR 455
P HD+ + +A + N V+E+PR + K E+ L VK + + + V+PH
Sbjct: 40 PWHDLEI-GPEAPTIFNCVIEIPRGSKVKYELDKKTGL------VKVDRVLYSSVVYPH- 91
Query: 456 GYIWNYGALPQT 491
NYG +P+T
Sbjct: 92 ----NYGFIPRT 99
>02_05_0448 -
29100674-29100716,29100821-29100902,29101010-29101130,
29101481-29101546,29101628-29101735,29102083-29102148,
29102605-29102633,29102773-29102902
Length = 214
Score = 33.1 bits (72), Expect = 0.30
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +3
Query: 276 PMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEALNPIKQDVKKGNLRFVNNVFPHR 455
P HD+ + A + N VVE+PR + K E+ L +K + + + V+PH
Sbjct: 37 PWHDLEI-GPGAPAVFNCVVEIPRGSKVKYELDKATGL------IKVDRVLYSSVVYPH- 88
Query: 456 GYIWNYGALPQT 491
NYG +P+T
Sbjct: 89 ----NYGFIPRT 96
>05_04_0447 +
21347786-21347974,21348104-21348169,21348266-21348373,
21348469-21348534,21348662-21348782,21348880-21348961,
21349052-21349094
Length = 224
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +1
Query: 538 DNDPVDVIEIGERVASRGDVYPVKILGTLXLIDEXXTDWXLIXIDSRD 681
DNDP+DV+ + + G + +G + +ID+ D +I + + D
Sbjct: 110 DNDPMDVLVLMQEPVLPGSFLRARAIGLMPMIDQGEKDDKIIAVCADD 157
>04_04_1663 -
35156098-35156140,35156273-35156354,35156506-35156575,
35156682-35156747,35156976-35157083,35157328-35157393,
35158451-35158479,35158566-35158692
Length = 196
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +1
Query: 538 DNDPVDVIEIGERVASRGDVYPVKILGTLXLIDEXXTDWXLIXIDSRD 681
DNDP+DV+ + + G + +G + +ID+ D +I + + D
Sbjct: 99 DNDPMDVLVLMQEPVIPGSFLRARAIGLMPMIDQGEKDDKIIAVCADD 146
>01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,
8048455-8048540,8048698-8048983,8049063-8049205,
8049308-8049508,8049626-8049754,8050463-8050738,
8050823-8051098,8051364-8052364,8052452-8052634,
8052865-8052937,8053205-8053313,8053622-8053785
Length = 1093
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 276 PMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEALNPIKQDVKKGNL 425
P D W +A+RL+ + T+ K E LG L K+D +KGNL
Sbjct: 893 PYCDNDFWPGEAERLLEKKDDD---TSQKKETQLGRLLRVAKRDDRKGNL 939
>05_01_0108 -
709031-709204,709294-709359,709607-709714,709822-709887,
710125-710153,710239-710374
Length = 192
Score = 29.5 bits (63), Expect = 3.7
Identities = 20/72 (27%), Positives = 34/72 (47%)
Frame = +3
Query: 276 PMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEALNPIKQDVKKGNLRFVNNVFPHR 455
P HD+ + A + N V+E+PR + K E+ L + + + + V+PH
Sbjct: 39 PWHDLEI-GPGAPTIFNCVIEIPRGSKVKYELDKKTGL------IVVDRVLYSSVVYPH- 90
Query: 456 GYIWNYGALPQT 491
NYG +P+T
Sbjct: 91 ----NYGFIPRT 98
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 538 DNDPVDVIEIGERVASRGDVYPVKILGTLXLIDEXXTDWXLIXIDSRD 681
D+DP+DV+ I + G K +G + +ID+ D +I + + D
Sbjct: 102 DSDPLDVLVIMQEPVIPGCFLRAKAIGLMPMIDQGEADDKIIAVCADD 149
>05_05_0132 -
22611030-22611908,22612016-22612135,22612644-22612856,
22612968-22613288,22613421-22613504
Length = 538
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +2
Query: 275 AHARHSTMGRQSSTPRQHGSRST*MDQCENGDQPRGGPQSYQAGRKERQPSVREQRLPSS 454
A R + G + PR+ G R + + RG + + R+ R+P R + +
Sbjct: 378 AELRAARGGERQPGPRREGRRRPPLAAAHDEPAVRGAAEEAEPRRRRRRPGERRRGAADA 437
Query: 455 RLHLE 469
LH +
Sbjct: 438 ELHAD 442
>02_01_0791 - 5930553-5930802,5931042-5932351
Length = 519
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3
Query: 465 RCSRDEGRRCSRTEGCLS 412
RCSRD RCSR GC +
Sbjct: 118 RCSRDAFMRCSRLAGCFT 135
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,145,962
Number of Sequences: 37544
Number of extensions: 323108
Number of successful extensions: 801
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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