Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_I09
         (872 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U66581-1|AAC51304.1|  433|Homo sapiens putative G protein-couple...    32   3.1  
AC002381-2|AAB63815.1|  433|Homo sapiens unknown protein.              32   3.1  
AB209270-1|BAD92507.1|  449|Homo sapiens G protein-coupled recep...    32   3.1  
BC107128-1|AAI07129.1|  433|Homo sapiens G protein-coupled recep...    31   5.5  

>U66581-1|AAC51304.1|  433|Homo sapiens putative G protein-coupled
           receptor protein.
          Length = 433

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
 Frame = +3

Query: 144 FCVLRFVXXIX-NKTIIVGVCGXLRAVLSIGNVLTMVLHVTSMCCGIXLRXICFVIAYLH 320
           F +L  V  +  N T++V  C     + S+ N++TM LHV  +   +    +  VI  L 
Sbjct: 47  FLMLEIVLGLGSNLTVLVLYCMKSNLINSVSNIITMNLHVLDVIICVGCIPLTIVILLLS 106

Query: 321 LVS-CVLDIAFHLLTVAIVT 377
           L S   L   FH   V+  +
Sbjct: 107 LESNTALICCFHEACVSFAS 126


>AC002381-2|AAB63815.1|  433|Homo sapiens unknown protein.
          Length = 433

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
 Frame = +3

Query: 144 FCVLRFVXXIX-NKTIIVGVCGXLRAVLSIGNVLTMVLHVTSMCCGIXLRXICFVIAYLH 320
           F +L  V  +  N T++V  C     + S+ N++TM LHV  +   +    +  VI  L 
Sbjct: 47  FLMLEIVLGLGSNLTVLVLYCMKSNLINSVSNIITMNLHVLDVIICVGCIPLTIVILLLS 106

Query: 321 LVS-CVLDIAFHLLTVAIVT 377
           L S   L   FH   V+  +
Sbjct: 107 LESNTALICCFHEACVSFAS 126


>AB209270-1|BAD92507.1|  449|Homo sapiens G protein-coupled receptor
           22 variant protein.
          Length = 449

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
 Frame = +3

Query: 144 FCVLRFVXXIX-NKTIIVGVCGXLRAVLSIGNVLTMVLHVTSMCCGIXLRXICFVIAYLH 320
           F +L  V  +  N T++V  C     + S+ N++TM LHV  +   +    +  VI  L 
Sbjct: 63  FLMLEIVLGLGSNLTVLVLYCMKSNLINSVSNIITMNLHVLDVIICVGCIPLTIVILLLS 122

Query: 321 LVS-CVLDIAFHLLTVAIVT 377
           L S   L   FH   V+  +
Sbjct: 123 LESNTALICCFHEACVSFAS 142


>BC107128-1|AAI07129.1|  433|Homo sapiens G protein-coupled receptor
           22 protein.
          Length = 433

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = +3

Query: 177 NKTIIVGVCGXLRAVLSIGNVLTMVLHVTSMCCGIXLRXICFVIAYLHLVS-CVLDIAFH 353
           N T++V  C     + S+ N++TM LHV  +   +    +  VI  L L S   L   FH
Sbjct: 59  NLTVLVLYCMKSNLINSVSNIITMNLHVLDVIICVGCIPLTIVILLLSLESNTALICCFH 118

Query: 354 LLTVAIVT 377
              V+  +
Sbjct: 119 EACVSFAS 126


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,190,156
Number of Sequences: 237096
Number of extensions: 1931035
Number of successful extensions: 2414
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2414
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)