Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_I08
         (838 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0633 - 19123930-19124009,19124240-19124344,19124453-191245...   104   8e-23
09_04_0632 - 19121654-19121783,19121910-19122091,19122752-19122841    103   1e-22
09_04_0630 + 19104678-19105463,19106169-19106348,19107775-191078...   102   3e-22
08_02_1315 + 26083856-26083945,26084093-26084226,26084753-260848...    81   1e-15
05_03_0517 - 14936085-14936867                                         28   8.0  
04_03_0387 - 15251816-15251905,15251999-15252069,15252098-152523...    28   8.0  

>09_04_0633 -
           19123930-19124009,19124240-19124344,19124453-19124543,
           19124647-19124709,19126318-19126368,19126878-19126962,
           19127102-19127283,19128493-19128582
          Length = 248

 Score =  104 bits (250), Expect = 8e-23
 Identities = 53/98 (54%), Positives = 66/98 (67%)
 Frame = +2

Query: 128 PVYRPTIVKKRXQRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIWVYRVSQ 307
           P+    IVKKR ++F R  SDRY  LK +WR+P+GID+RVRR+FKG  LMPNI       
Sbjct: 4   PLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPNI---GYGS 60

Query: 308 TKKXRHMLPNGFRKVLVHNVKELEILMMQKGSTAQKIA 421
            KK RH LPN F+K +VHNV ELE+LMM   +   +IA
Sbjct: 61  DKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIA 98


>09_04_0632 - 19121654-19121783,19121910-19122091,19122752-19122841
          Length = 133

 Score =  103 bits (248), Expect = 1e-22
 Identities = 53/98 (54%), Positives = 65/98 (66%)
 Frame = +2

Query: 128 PVYRPTIVKKRXQRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIWVYRVSQ 307
           P+    IVKKR ++F R  SDRY  LK +WR+P+GID+RVRR+FKG  LMPNI       
Sbjct: 4   PLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPNI---GYGS 60

Query: 308 TKKXRHMLPNGFRKVLVHNVKELEILMMQKGSTAQKIA 421
            KK RH LPN F+K +VHNV ELE+LMM       +IA
Sbjct: 61  DKKTRHYLPNKFKKFVVHNVSELELLMMHNRMYCAEIA 98


>09_04_0630 +
           19104678-19105463,19106169-19106348,19107775-19107864,
           19108777-19108958,19109968-19109974,19111763-19111833,
           19112188-19112224,19112433-19112603
          Length = 507

 Score =  102 bits (245), Expect = 3e-22
 Identities = 51/88 (57%), Positives = 62/88 (70%)
 Frame = +2

Query: 128 PVYRPTIVKKRXQRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIWVYRVSQ 307
           P+    IVKKR ++F R  SDRY  LK +WR+P+GID+RVRR+FKG  LMPNI       
Sbjct: 326 PLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPNI---GYGS 382

Query: 308 TKKXRHMLPNGFRKVLVHNVKELEILMM 391
            KK RH LPN F+K +VHNV ELE+LMM
Sbjct: 383 DKKTRHYLPNKFKKFVVHNVSELELLMM 410


>08_02_1315 +
           26083856-26083945,26084093-26084226,26084753-26084819,
           26085011-26085192,26085315-26085444
          Length = 200

 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 39/70 (55%), Positives = 49/70 (70%)
 Frame = +2

Query: 212 NWRKPRGIDNRVRRRFKGQYLMPNIWVYRVSQTKKXRHMLPNGFRKVLVHNVKELEILMM 391
           +WR+P+GID+RVRR+FKG  LMPNI        KK RH LPN F+K +VHNV ELE+LMM
Sbjct: 99  SWRRPKGIDSRVRRKFKGCTLMPNIGY---GSDKKTRHYLPNKFKKFVVHNVSELELLMM 155

Query: 392 QKGSTAQKIA 421
              +   +IA
Sbjct: 156 HNRTYCAEIA 165


>05_03_0517 - 14936085-14936867
          Length = 260

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 254 RFKGQYLMPNIWVYRVSQTKKXR 322
           RF+  +LMPN W Y++   K+ R
Sbjct: 6   RFRLSHLMPNSWFYKLRDMKRPR 28


>04_03_0387 -
           15251816-15251905,15251999-15252069,15252098-15252323,
           15252344-15252496,15252570-15252656,15252745-15252948,
           15253038-15253159,15253354-15253507,15254329-15254434,
           15254507-15254617,15256468-15256622
          Length = 492

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 20/80 (25%), Positives = 36/80 (45%)
 Frame = +2

Query: 71  VTAWXPVAFLKATSKLALSPVYRPTIVKKRXQRFIRHQSDRYDKLKRNWRKPRGIDNRVR 250
           +  W    F++   +  ++ V R   +  R + ++ HQ D        WR+ +G      
Sbjct: 195 ILKWNDKIFIRIYHQKMITEVKRKFAIDGRAKSWLLHQLDG------KWRQYKG------ 242

Query: 251 RRFKGQYLMPNIWVYRVSQT 310
            + KG+Y  PN+ + RV QT
Sbjct: 243 -KLKGKYYKPNLPMERVLQT 261


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,588,258
Number of Sequences: 37544
Number of extensions: 175398
Number of successful extensions: 390
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 386
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)