Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_I08
         (838 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X03342-1|CAA27048.1|  135|Homo sapiens protein ( Human mRNA for ...   143   8e-34
BC070209-1|AAH70209.1|  135|Homo sapiens ribosomal protein L32 p...   143   8e-34
BC011514-1|AAH11514.1|  135|Homo sapiens ribosomal protein L32 p...   143   8e-34
AB061831-1|BAB79469.1|  135|Homo sapiens ribosomal protein L32 p...   143   8e-34
BC015974-1|AAH15974.1|  107|Homo sapiens RPS29 protein protein.        48   4e-05
BC053996-1|AAH53996.1|   33|Homo sapiens RPL32P3 protein protein.      46   2e-04
BC015389-1|AAH15389.1|   82|Homo sapiens RPL32P3 protein protein.      44   0.001

>X03342-1|CAA27048.1|  135|Homo sapiens protein ( Human mRNA for
           ribosomal protein L32. ).
          Length = 135

 Score =  143 bits (346), Expect = 8e-34
 Identities = 69/101 (68%), Positives = 79/101 (78%)
 Frame = +2

Query: 119 ALSPVYRPTIVKKRXQRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIWVYR 298
           AL P+ +P IVKKR ++FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNI    
Sbjct: 3   ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNI---G 59

Query: 299 VSQTKKXRHMLPNGFRKVLVHNVKELEILMMQKGSTAQKIA 421
               KK +HMLP+GFRK LVHNVKELE+L+M   S   +IA
Sbjct: 60  YGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIA 100


>BC070209-1|AAH70209.1|  135|Homo sapiens ribosomal protein L32
           protein.
          Length = 135

 Score =  143 bits (346), Expect = 8e-34
 Identities = 69/101 (68%), Positives = 79/101 (78%)
 Frame = +2

Query: 119 ALSPVYRPTIVKKRXQRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIWVYR 298
           AL P+ +P IVKKR ++FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNI    
Sbjct: 3   ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNI---G 59

Query: 299 VSQTKKXRHMLPNGFRKVLVHNVKELEILMMQKGSTAQKIA 421
               KK +HMLP+GFRK LVHNVKELE+L+M   S   +IA
Sbjct: 60  YGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIA 100


>BC011514-1|AAH11514.1|  135|Homo sapiens ribosomal protein L32
           protein.
          Length = 135

 Score =  143 bits (346), Expect = 8e-34
 Identities = 69/101 (68%), Positives = 79/101 (78%)
 Frame = +2

Query: 119 ALSPVYRPTIVKKRXQRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIWVYR 298
           AL P+ +P IVKKR ++FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNI    
Sbjct: 3   ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNI---G 59

Query: 299 VSQTKKXRHMLPNGFRKVLVHNVKELEILMMQKGSTAQKIA 421
               KK +HMLP+GFRK LVHNVKELE+L+M   S   +IA
Sbjct: 60  YGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIA 100


>AB061831-1|BAB79469.1|  135|Homo sapiens ribosomal protein L32
           protein.
          Length = 135

 Score =  143 bits (346), Expect = 8e-34
 Identities = 69/101 (68%), Positives = 79/101 (78%)
 Frame = +2

Query: 119 ALSPVYRPTIVKKRXQRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIWVYR 298
           AL P+ +P IVKKR ++FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNI    
Sbjct: 3   ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNI---G 59

Query: 299 VSQTKKXRHMLPNGFRKVLVHNVKELEILMMQKGSTAQKIA 421
               KK +HMLP+GFRK LVHNVKELE+L+M   S   +IA
Sbjct: 60  YGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIA 100


>BC015974-1|AAH15974.1|  107|Homo sapiens RPS29 protein protein.
          Length = 107

 Score = 48.0 bits (109), Expect = 4e-05
 Identities = 25/48 (52%), Positives = 32/48 (66%)
 Frame = +2

Query: 275 MPNIWVYRVSQTKKXRHMLPNGFRKVLVHNVKELEILMMQKGSTAQKI 418
           MPNI   R    KK +H+LP+GF K LVHNVKELE+L++   S   +I
Sbjct: 27  MPNIGYGR---NKKTKHILPSGFWKFLVHNVKELEVLLVSNKSYCVEI 71


>BC053996-1|AAH53996.1|   33|Homo sapiens RPL32P3 protein protein.
          Length = 33

 Score = 45.6 bits (103), Expect = 2e-04
 Identities = 20/31 (64%), Positives = 25/31 (80%)
 Frame = +2

Query: 119 ALSPVYRPTIVKKRXQRFIRHQSDRYDKLKR 211
           AL  + +P IVKKR ++FIRHQSDRY K+KR
Sbjct: 3   ALRSLVKPKIVKKRTKKFIRHQSDRYVKIKR 33


>BC015389-1|AAH15389.1|   82|Homo sapiens RPL32P3 protein protein.
          Length = 82

 Score = 43.6 bits (98), Expect = 0.001
 Identities = 19/30 (63%), Positives = 24/30 (80%)
 Frame = +2

Query: 119 ALSPVYRPTIVKKRXQRFIRHQSDRYDKLK 208
           AL  + +P IVKKR ++FIRHQSDRY K+K
Sbjct: 3   ALRSLVKPKIVKKRTKKFIRHQSDRYVKIK 32


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,764,084
Number of Sequences: 237096
Number of extensions: 955815
Number of successful extensions: 2482
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2478
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)