Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_I08
         (838 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011442-1|AAR99100.1|  147|Drosophila melanogaster RE59709p pro...   141   1e-33
AE014297-4525|AAN14210.1|  147|Drosophila melanogaster CG7939-PC...   141   1e-33
Y13939-1|CAA74278.1|  134|Drosophila melanogaster ribosomal prot...   139   5e-33
U92431-1|AAB51389.1|  134|Drosophila melanogaster ribosomal prot...   139   5e-33
AY070656-1|AAL48127.1|  134|Drosophila melanogaster RH03940p pro...   139   5e-33
AE014297-4527|AAN14211.1|  134|Drosophila melanogaster CG7939-PB...   139   5e-33
AE014297-4526|AAF57001.1|  134|Drosophila melanogaster CG7939-PA...   139   5e-33
X00848-1|CAA25404.1|  133|Drosophila melanogaster ribosomal prot...   135   8e-32

>BT011442-1|AAR99100.1|  147|Drosophila melanogaster RE59709p
           protein.
          Length = 147

 Score =  141 bits (341), Expect = 1e-33
 Identities = 66/103 (64%), Positives = 76/103 (73%)
 Frame = +2

Query: 113 KLALSPVYRPTIVKKRXQRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIWV 292
           K+ + P YRP IVKKR + FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNI  
Sbjct: 13  KMTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNI-- 70

Query: 293 YRVSQTKKXRHMLPNGFRKVLVHNVKELEILMMQKGSTAQKIA 421
                 K+ RHMLP GF+K LVHNV+ELE+L+MQ      +IA
Sbjct: 71  -GYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIA 112


>AE014297-4525|AAN14210.1|  147|Drosophila melanogaster CG7939-PC,
           isoform C protein.
          Length = 147

 Score =  141 bits (341), Expect = 1e-33
 Identities = 66/103 (64%), Positives = 76/103 (73%)
 Frame = +2

Query: 113 KLALSPVYRPTIVKKRXQRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIWV 292
           K+ + P YRP IVKKR + FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNI  
Sbjct: 13  KMTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNI-- 70

Query: 293 YRVSQTKKXRHMLPNGFRKVLVHNVKELEILMMQKGSTAQKIA 421
                 K+ RHMLP GF+K LVHNV+ELE+L+MQ      +IA
Sbjct: 71  -GYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIA 112


>Y13939-1|CAA74278.1|  134|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 134

 Score =  139 bits (336), Expect = 5e-33
 Identities = 65/102 (63%), Positives = 75/102 (73%)
 Frame = +2

Query: 116 LALSPVYRPTIVKKRXQRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIWVY 295
           + + P YRP IVKKR + FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNI   
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNI--- 57

Query: 296 RVSQTKKXRHMLPNGFRKVLVHNVKELEILMMQKGSTAQKIA 421
                K+ RHMLP GF+K LVHNV+ELE+L+MQ      +IA
Sbjct: 58  GYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIA 99


>U92431-1|AAB51389.1|  134|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 134

 Score =  139 bits (336), Expect = 5e-33
 Identities = 65/102 (63%), Positives = 75/102 (73%)
 Frame = +2

Query: 116 LALSPVYRPTIVKKRXQRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIWVY 295
           + + P YRP IVKKR + FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNI   
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNI--- 57

Query: 296 RVSQTKKXRHMLPNGFRKVLVHNVKELEILMMQKGSTAQKIA 421
                K+ RHMLP GF+K LVHNV+ELE+L+MQ      +IA
Sbjct: 58  GYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIA 99


>AY070656-1|AAL48127.1|  134|Drosophila melanogaster RH03940p
           protein.
          Length = 134

 Score =  139 bits (336), Expect = 5e-33
 Identities = 65/102 (63%), Positives = 75/102 (73%)
 Frame = +2

Query: 116 LALSPVYRPTIVKKRXQRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIWVY 295
           + + P YRP IVKKR + FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNI   
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNI--- 57

Query: 296 RVSQTKKXRHMLPNGFRKVLVHNVKELEILMMQKGSTAQKIA 421
                K+ RHMLP GF+K LVHNV+ELE+L+MQ      +IA
Sbjct: 58  GYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIA 99


>AE014297-4527|AAN14211.1|  134|Drosophila melanogaster CG7939-PB,
           isoform B protein.
          Length = 134

 Score =  139 bits (336), Expect = 5e-33
 Identities = 65/102 (63%), Positives = 75/102 (73%)
 Frame = +2

Query: 116 LALSPVYRPTIVKKRXQRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIWVY 295
           + + P YRP IVKKR + FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNI   
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNI--- 57

Query: 296 RVSQTKKXRHMLPNGFRKVLVHNVKELEILMMQKGSTAQKIA 421
                K+ RHMLP GF+K LVHNV+ELE+L+MQ      +IA
Sbjct: 58  GYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIA 99


>AE014297-4526|AAF57001.1|  134|Drosophila melanogaster CG7939-PA,
           isoform A protein.
          Length = 134

 Score =  139 bits (336), Expect = 5e-33
 Identities = 65/102 (63%), Positives = 75/102 (73%)
 Frame = +2

Query: 116 LALSPVYRPTIVKKRXQRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIWVY 295
           + + P YRP IVKKR + FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNI   
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNI--- 57

Query: 296 RVSQTKKXRHMLPNGFRKVLVHNVKELEILMMQKGSTAQKIA 421
                K+ RHMLP GF+K LVHNV+ELE+L+MQ      +IA
Sbjct: 58  GYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIA 99


>X00848-1|CAA25404.1|  133|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 133

 Score =  135 bits (326), Expect = 8e-32
 Identities = 62/93 (66%), Positives = 71/93 (76%)
 Frame = +2

Query: 116 LALSPVYRPTIVKKRXQRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIWVY 295
           + + P YRP IVKKR + FIRHQSDRY KL   WRKP+GIDNRV RRFKGQYLMPNI   
Sbjct: 1   MTIRPAYRPKIVKKRTKDFIRHQSDRYAKLSHKWRKPKGIDNRVGRRFKGQYLMPNI--- 57

Query: 296 RVSQTKKXRHMLPNGFRKVLVHNVKELEILMMQ 394
                K+ RHMLP GF+K LVHNV+ELE+L+MQ
Sbjct: 58  GYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQ 90


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,345,492
Number of Sequences: 53049
Number of extensions: 285267
Number of successful extensions: 592
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3983256888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)