Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_I08
         (838 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical pr...    98   8e-21
Z70756-9|CAA94797.1|  275|Caenorhabditis elegans Hypothetical pr...    29   4.1  

>Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical
           protein T24B8.1 protein.
          Length = 134

 Score = 97.9 bits (233), Expect = 8e-21
 Identities = 44/83 (53%), Positives = 62/83 (74%)
 Frame = +2

Query: 146 IVKKRXQRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIWVYRVSQTKKXRH 325
           +VKK+  +F RH+SDRY ++  +WRKP+GIDNRVRRRF+G   MP I        ++ R 
Sbjct: 11  VVKKKLTKFKRHESDRYRRVAPSWRKPKGIDNRVRRRFRGMRAMPTI---GHGSDRRTRF 67

Query: 326 MLPNGFRKVLVHNVKELEILMMQ 394
           +LPNG++KVLV NVK+L++L+MQ
Sbjct: 68  VLPNGYKKVLVQNVKDLDMLLMQ 90


>Z70756-9|CAA94797.1|  275|Caenorhabditis elegans Hypothetical
           protein T06E4.11 protein.
          Length = 275

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +1

Query: 238 QQSPQAVQGSILDAQHLGLPXFPNXEXPSY 327
           QQ PQ +QGS   +Q   +P  P  + PSY
Sbjct: 160 QQYPQGLQGSPQGSQQQQMPPQPQQQMPSY 189


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,808,750
Number of Sequences: 27780
Number of extensions: 144266
Number of successful extensions: 308
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 307
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)