Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_I06
(898 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81038-12|CAB02758.2| 380|Caenorhabditis elegans Hypothetical p... 37 0.017
U40419-1|AAA81422.1| 283|Caenorhabditis elegans Hypothetical pr... 33 0.28
AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical ... 30 2.0
AF003385-6|AAB54246.1| 354|Caenorhabditis elegans Hypothetical ... 29 3.4
U97004-3|AAB52277.1| 365|Caenorhabditis elegans Hypothetical pr... 29 4.5
U00044-7|AAA50675.1| 990|Caenorhabditis elegans Hypothetical pr... 29 4.5
U42439-9|AAM98033.1| 294|Caenorhabditis elegans Hypothetical pr... 29 6.0
U42439-8|AAM98032.1| 431|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z68134-4|CAA92224.1| 567|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical pr... 28 7.9
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 28 7.9
AF025471-10|AAB71059.1| 326|Caenorhabditis elegans Hypothetical... 28 7.9
>Z81038-12|CAB02758.2| 380|Caenorhabditis elegans Hypothetical
protein C25A1.3 protein.
Length = 380
Score = 37.1 bits (82), Expect = 0.017
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Frame = +3
Query: 276 VLDAACGTGIDSMMLVNEGFK-VVSVDASDKMLKHA---LKARWDKRKNPKYD-DWVIEE 440
VLD ACG G D G K VV D +D ++ A K + +KN + +++ +
Sbjct: 58 VLDLACGKGGDLKKWDIAGAKDVVMADVADVSIQQAEERYKQMFGYKKNNIFTVQFIVAD 117
Query: 441 ANWETLPQDIETFLPDTQFDAVICLGNSFAHLLDEYGDQRMQKLCLSNFAKCLKPGGL 614
E L IE P FD V C FA L + D+ ++ L N LKPGG+
Sbjct: 118 CTKENLEDRIENKDP---FDLVSC---QFA-LHYSFVDEASARIFLKNAVGMLKPGGV 168
>U40419-1|AAA81422.1| 283|Caenorhabditis elegans Hypothetical
protein C27F2.4 protein.
Length = 283
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 276 VLDAACGTGIDSMMLVNEGFKVVSVDASDKMLKHA 380
+LD CGTG+ S ++++ G V VD S ML+ A
Sbjct: 57 LLDIGCGTGMSSEVILDAGHMFVGVDVSRPMLEIA 91
>AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical
protein C18H7.9 protein.
Length = 144
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 249 LLKNN-GCKTVLDAACGTGIDSMMLVNEGF-KVVSVDASDKMLKH 377
LLK N K VLD CG G++S + G KVV D S +M+++
Sbjct: 31 LLKYNLKDKKVLDIGCGNGLNSTTFLQWGARKVVGFDNSQEMIEN 75
>AF003385-6|AAB54246.1| 354|Caenorhabditis elegans Hypothetical
protein R08F11.4 protein.
Length = 354
Score = 29.5 bits (63), Expect = 3.4
Identities = 34/118 (28%), Positives = 45/118 (38%), Gaps = 2/118 (1%)
Frame = +3
Query: 276 VLDAACGTGIDSMMLVNEGFK--VVSVDASDKMLKHALKARWDKRKNPKYDDWVIEEANW 449
VLD CG G S +L K V +D ++K +K A R K D E +
Sbjct: 169 VLDVGCGGGFHSGLLAEHYPKSQFVGLDITEKAIKAA-------RLKKKSDGTDFENLEF 221
Query: 450 ETLPQDIETFLPDTQFDAVICLGNSFAHLLDEYGDQRMQKLCLSNFAKCLKPGGLLFI 623
I FD VI G+ H DQ LCL + +KP GL+ +
Sbjct: 222 VVADAAIMPSSWTDSFDLVILFGS--CH------DQMRPDLCLLEVHRVVKPDGLVAV 271
>U97004-3|AAB52277.1| 365|Caenorhabditis elegans Hypothetical
protein R08E5.3 protein.
Length = 365
Score = 29.1 bits (62), Expect = 4.5
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Frame = +3
Query: 276 VLDAACGTGIDSMMLVNEGFK--VVSVDASDKMLKHALKARWDKRKNPKYDDWVIEEANW 449
VLD CG G S +L + K V +D + ++ A + + + +++ E +
Sbjct: 179 VLDVGCGGGFHSSLLAEQYPKSHFVGLDIGEDAIRQAKQRK--TKSGAAFNNLEFIECDA 236
Query: 450 ETLPQDIETFLPDTQFDAVICLGNSFAHLLDEYGDQRMQKLCLSNFAKCLKPGGL 614
+P+ + FD V+ + D DQR LC+ + LKP G+
Sbjct: 237 GKMPE-----IWTDSFDLVL--------IFDACHDQRRPDLCVQEIHRVLKPSGM 278
>U00044-7|AAA50675.1| 990|Caenorhabditis elegans Hypothetical
protein K04C2.2 protein.
Length = 990
Score = 29.1 bits (62), Expect = 4.5
Identities = 24/108 (22%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Frame = +3
Query: 279 LDAACGTGIDSMMLVNEGFKVVSVDASDKM-----LKHALKA--RWDKRKNPKYDDWVIE 437
+D ACGTG+ + +L N G K +SV + + ++ + A WD++ ++
Sbjct: 355 VDKACGTGLTTALLSNLGKKQISVWIKENLSNQDEVRKIVSAFSNWDEKSRITVLSALLS 414
Query: 438 EANWETLPQDIETFLPDTQFDAVICLGNSFAHLLDEYGDQRMQKLCLS 581
+ ET Q + T + D+ F G + + E ++ +++L ++
Sbjct: 415 QKATET-SQSVVTSIIDSLFYVKTRAGEFASIQISEKNEEVLRQLVVA 461
>U42439-9|AAM98033.1| 294|Caenorhabditis elegans Hypothetical
protein F19C7.8b protein.
Length = 294
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -3
Query: 695 FAIIIN*MPRSGSSVDHRIIVPVVDKQEPAWLQAFREVAQTQLLHPLVSVLIQQM 531
+ +I P +GSS+ V VVD +P WL FR +T+ + + + QM
Sbjct: 180 YIVIHEYSPSNGSSLVLGEKVRVVDNGDPDWLHGFRLNDRTEHMISFPATCVAQM 234
>U42439-8|AAM98032.1| 431|Caenorhabditis elegans Hypothetical
protein F19C7.8a protein.
Length = 431
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -3
Query: 695 FAIIIN*MPRSGSSVDHRIIVPVVDKQEPAWLQAFREVAQTQLLHPLVSVLIQQM 531
+ +I P +GSS+ V VVD +P WL FR +T+ + + + QM
Sbjct: 317 YIVIHEYSPSNGSSLVLGEKVRVVDNGDPDWLHGFRLNDRTEHMISFPATCVAQM 371
>Z68134-4|CAA92224.1| 567|Caenorhabditis elegans Hypothetical
protein T27A8.5 protein.
Length = 567
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -1
Query: 604 GFRHFAKLLRHSFCILWSPYSSNKWAN---EFPRHMTASN*VSGRN 476
GFRH + L FC+ Y ++ N P H+T + ++GRN
Sbjct: 200 GFRHHSAKLSCFFCLAPETYYKHEGPNRKLSRPGHLTIQDSINGRN 245
>Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical protein
ZK512.5 protein.
Length = 1232
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = -1
Query: 403 LLSQRALRACFNILSEASTDTTLNPSFTSIMES--IPVPQAASKTVLQPLFFKRPIKKSL 230
L+++ + + F S++S + S TS + S +P P + KT+ +P+ PI K++
Sbjct: 880 LVTESSSESTFTDKSDSSVTVAASASRTSTLTSSTLPPPPSLPKTIEKPISTPPPISKNV 939
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 28.3 bits (60), Expect = 7.9
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +3
Query: 105 QVFHSRSLGIPSEGVKDQYADGKAAKTWNKFIGDSNQRTQNYKDFLIGLLKNNGCKTVLD 284
+V SL S KD + +A K K ++ +Y D L GL++N +LD
Sbjct: 1919 EVITGESLSDASSSAKDATTN-EAQKKGGKKPKKWFKKMSSYTDVLKGLMQNRYPVALLD 1977
Query: 285 -AACGTGIDSMM 317
AA G +D MM
Sbjct: 1978 PAAAGIEMDEMM 1989
>AF025471-10|AAB71059.1| 326|Caenorhabditis elegans Hypothetical
protein R52.1 protein.
Length = 326
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -3
Query: 299 STTSGVQNSLAAVVLQETDQEVFVVLRSLITISDEL-VPCFCRFAVSVLIFYTLG 138
+T G+ N+L + D EV + L +DE + C RF V LIF T+G
Sbjct: 270 NTPYGI-NALMPFDHNDMDPEVVMALLKKSLATDEFYLDCIMRFTVICLIFITVG 323
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,533,216
Number of Sequences: 27780
Number of extensions: 376652
Number of successful extensions: 1305
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1304
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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