Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_I04
         (880 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK097297-1|BAC04995.1|  261|Homo sapiens protein ( Homo sapiens ...    33   1.8  
BC016754-1|AAH16754.1|   76|Homo sapiens KPNA4 protein protein.        31   7.3  

>AK097297-1|BAC04995.1|  261|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39978 fis, clone SPLEN2029380. ).
          Length = 261

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 12/84 (14%)
 Frame = +1

Query: 403 CCTAGLFQ---CSNNYFVLFF-IFYVH----TMFF----FFIYLIMSICIIPLCLLFIVD 546
           C +A LF    C  +Y V F  IF +H    + FF    FF++L   IC+    + +++ 
Sbjct: 52  CLSASLFLPPCCVFHYIVAFLSIFLIHCHYVSAFFLSPCFFLHLFFCICLPYHFISYLIS 111

Query: 547 VAIIVSVCFMIRISHDVKETGRKV 618
           + + V VC  + +S  V    R V
Sbjct: 112 LCVCVCVCVCVCLSVSVIYVSRLV 135


>BC016754-1|AAH16754.1|   76|Homo sapiens KPNA4 protein protein.
          Length = 76

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 445 VLFFIFYVHTMFFFFIYLIMSICI 516
           +LFF F+    FFF  YL+  +C+
Sbjct: 32  ILFFFFFAFLFFFFSFYLLYLVCL 55


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,786,926
Number of Sequences: 237096
Number of extensions: 1577952
Number of successful extensions: 2777
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2770
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)