Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_I03
(865 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 36 0.042
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 34 0.13
11_01_0172 - 1383568-1384440,1385336-1385401,1385470-1385505,138... 33 0.39
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 31 0.90
07_03_1136 + 24218601-24218734,24218769-24219906 31 1.2
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 30 2.1
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 30 2.1
12_01_0173 - 1292164-1293036,1294063-1294098,1294195-1294334,129... 29 3.6
03_01_0515 - 3864796-3865425 29 3.6
07_01_0080 + 587674-588510 29 4.8
02_05_0686 - 30900748-30902167,30903442-30904742 29 4.8
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 6.3
12_02_0640 - 21447470-21448309 28 8.4
12_02_0635 - 21430245-21431156 28 8.4
09_01_0165 - 2436769-2437442,2438159-2438224,2438318-2438415,243... 28 8.4
07_01_0479 + 3606663-3607448 28 8.4
04_04_0176 - 23329589-23331043 28 8.4
03_02_0122 - 5742530-5743705 28 8.4
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 35.9 bits (79), Expect = 0.042
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 727 SSXSPPP*LPXPXSSGXGXXXXPPPX-RXPVIPXSRGYPXXPXSPPG 864
++ +PPP P P ++G G PPP P P G P PPG
Sbjct: 329 AAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPG 375
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 34.3 bits (75), Expect = 0.13
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +1
Query: 727 SSXSPPP*LPXPXSSGXGXXXXPPPXRXPVIPXSRGYPXXPXSPP 861
SS PPP P P + PPP P++P +R P P PP
Sbjct: 582 SSQPPPPPPPPPLPNCLVPSPPPPPPPPPILP-NRSVPPPPPPPP 625
>11_01_0172 -
1383568-1384440,1385336-1385401,1385470-1385505,
1385604-1385743,1386978-1387134,1387245-1387418,
1387540-1387790,1390296-1390446
Length = 615
Score = 32.7 bits (71), Expect = 0.39
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +1
Query: 730 SXSPPP*LPXPXSSGXGXXXXPPPXRXPVIPXSRGYPXXPXSP 858
S PPP LP S+G PPP P P ++ P SP
Sbjct: 538 SAPPPPLLPNIMSAGFPRLSAPPPLPLPTQPQNQSQPQQQQSP 580
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 31.5 bits (68), Expect = 0.90
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = +1
Query: 736 SPPP*LPXPXSSGXGXXXXPPPXRXPVIPXSRGYPXXPXSPPG 864
+PPP P P G G P P P P G P P PPG
Sbjct: 1183 APPP--PPPRGHG-GVGGPPTPPGAPAPPMPPGVPGGPPPPPG 1222
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/58 (37%), Positives = 24/58 (41%)
Frame = -3
Query: 863 PGGXXGXXG*PRXXGITGXRXGGGXYXXPXPXXXGXGSXGGGEXEEXPIRKRPVPGGG 690
PGG G G R G G GGG P G G GGG P +R + GGG
Sbjct: 173 PGGGGGGGGPGRAPG--GGGGGGGPGRAPGGGGGGGGLGGGGGEGGAP--ERVIGGGG 226
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/57 (28%), Positives = 20/57 (35%)
Frame = -3
Query: 860 GGXXGXXG*PRXXGITGXRXGGGXYXXPXPXXXGXGSXGGGEXEEXPIRKRPVPGGG 690
GG G + G G G P P G G GGG + + + GGG
Sbjct: 320 GGGGGGGEIAGTVDLRGGGGGAGGVFPPTPDLGGGGGGGGGGTKVRVCAPKDISGGG 376
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +1
Query: 742 PP*LPXPXSSGXGXXXXPPPXRXPVIPXSRGYPXXPXSPPG 864
PP P +G G PPP + P P P P +P G
Sbjct: 250 PPAAPGTLPNGSGGPPRPPPPQVPPPPPQAPPPPPPNAPMG 290
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = +1
Query: 739 PPP*LPXPXSSGXGXXXXPPPXRXPVIPXSRGYPXXPXSPP 861
PPP P P PPP P +P + P P PP
Sbjct: 357 PPPPPPPPPKLNTAPKPPPPPPPPPSVPSNNNLP-KPAEPP 396
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/50 (30%), Positives = 19/50 (38%)
Frame = +1
Query: 715 RIGXSSXSPPP*LPXPXSSGXGXXXXPPPXRXPVIPXSRGYPXXPXSPPG 864
++ + PPP P P S P P P +P SR P P G
Sbjct: 366 KLNTAPKPPPP--PPPPPSVPSNNNLPKPAEPPAVPTSRRRLLKPLPPEG 413
>12_01_0173 -
1292164-1293036,1294063-1294098,1294195-1294334,
1295592-1295748,1295862-1296035,1296146-1296396,
1299446-1299590
Length = 591
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +1
Query: 730 SXSPPP*LPXPXSSGXGXXXXPPPXRXPVIPXSRGYPXXPXSP 858
S PPP LP S+G PPP P ++ P SP
Sbjct: 514 SAPPPPPLPNIMSAGFPRLSVPPPLPLPTQSQNQSQPQQQQSP 556
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +1
Query: 727 SSXSPPP*LPXPXSSGXGXXXXPPPXRXPVIPXSRGYPXXPXSPP 861
+S PPP LP P PPP P P P P P
Sbjct: 80 TSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPPPPAWSP 124
>07_01_0080 + 587674-588510
Length = 278
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/47 (40%), Positives = 20/47 (42%)
Frame = +1
Query: 721 GXSSXSPPP*LPXPXSSGXGXXXXPPPXRXPVIPXSRGYPXXPXSPP 861
G +S S PP L G G PPP P P S G P P PP
Sbjct: 72 GAASTSTPPRL-----GGDGMFRRPPPPPPP--PPSSGSPPPPPPPP 111
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +1
Query: 727 SSXSPPP*LPXPXSSGXGXXXXPPPXRXPVIPXSRGYPXXPXS--PP 861
+S +PPP P P + PPP P P +G P P + PP
Sbjct: 309 ASPAPPP-PPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPP 354
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +1
Query: 739 PPP*LPXPXSSGXGXXXXPPPXRXPVIPXSRGYPXXPXSPPG 864
PPP P G PP P P +G P PPG
Sbjct: 330 PPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPG 371
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +1
Query: 739 PPP*LPXPXSSGXGXXXXPPPXRXPVIPXSRGYPXXPXSP 858
PPP P P SG PPP P+ P P P SP
Sbjct: 1180 PPPPPPPPLPSGPPPQPAPPP--LPIQPPPIPPPPVPSSP 1217
>12_02_0640 - 21447470-21448309
Length = 279
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +1
Query: 739 PPP*LPX--PXSSGXGXXXXPPPXRXPVIPXSRGYPXXPXSPPG 864
PPP P SS PPP R RG P P PPG
Sbjct: 192 PPPTTKKKKPQSSRRPPARTPPPERRESPSPPRGRPRTPPPPPG 235
>12_02_0635 - 21430245-21431156
Length = 303
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +1
Query: 739 PPP*LPX--PXSSGXGXXXXPPPXRXPVIPXSRGYPXXPXSPPG 864
PPP P SS PPP R RG P P PPG
Sbjct: 189 PPPTTKKKKPQSSRRPPARTPPPERRESPSPPRGRPRTPPPPPG 232
>09_01_0165 -
2436769-2437442,2438159-2438224,2438318-2438415,
2439856-2440214
Length = 398
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 772 GXGXXXXPPPXRXPVIPXSRGYPXXPXSPP 861
G G PPP + PV+P P SPP
Sbjct: 238 GQGFNSPPPPGQGPVLPRDAPPMPPPPSPP 267
>07_01_0479 + 3606663-3607448
Length = 261
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +1
Query: 721 GXSSXSPPP*LPXPXSSGXGXXXXPPPXRXPVIPXSRGYPXXPXSPPG 864
G PPP P G PPP P +P P P PPG
Sbjct: 206 GPFMRGPPP--MGPPQVRPGMPGGPPPGMRPGMPPPPFRPGMPPPPPG 251
>04_04_0176 - 23329589-23331043
Length = 484
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +1
Query: 742 PP*LPXPXSSGXGXXXXPPPXRXPV-IPXSRGYPXXPXSPP 861
PP P P S PPP R P+ P ++ P P P
Sbjct: 61 PPKTPSPGHSALSPSPPPPPRRGPLPDPTAKAEPEPPKPTP 101
>03_02_0122 - 5742530-5743705
Length = 391
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -3
Query: 773 PXXXGXGSXGGGEXEEXP-IRKRPVPGGG 690
P G G GGG EE +K+P GGG
Sbjct: 146 PTSGGGGGYGGGRYEEEDNYKKKPTSGGG 174
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,347,630
Number of Sequences: 37544
Number of extensions: 331082
Number of successful extensions: 1024
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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