Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_I02
         (881 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1294 - 36076524-36076554,36076821-36076891,36077221-360772...    96   4e-20
05_05_0108 + 22451440-22451541,22452228-22452427,22452979-22453018     95   5e-20
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277...    28   8.6  

>01_06_1294 -
           36076524-36076554,36076821-36076891,36077221-36077275,
           36077363-36077562,36078614-36078715
          Length = 152

 Score = 95.9 bits (228), Expect = 4e-20
 Identities = 47/82 (57%), Positives = 58/82 (70%)
 Frame = +2

Query: 170 LTAKAISIRPASLKGLQTXHSKFVRDLVREVVGHAQYEKXAMELLKVSKDKRALKFLKRR 349
           +T + +  RP+  KG  T    FVR L+REVVG A YEK   ELLKV KDKRALK  KR+
Sbjct: 20  VTKRELPPRPSDRKGKSTKRVNFVRGLIREVVGFAPYEKRITELLKVGKDKRALKVAKRK 79

Query: 350 LGTHIRAKRKREELSNVLAQMR 415
           LGTH RAK+KREE++ V+ +MR
Sbjct: 80  LGTHKRAKKKREEMAGVIRKMR 101


>05_05_0108 + 22451440-22451541,22452228-22452427,22452979-22453018
          Length = 113

 Score = 95.5 bits (227), Expect = 5e-20
 Identities = 47/82 (57%), Positives = 58/82 (70%)
 Frame = +2

Query: 170 LTAKAISIRPASLKGLQTXHSKFVRDLVREVVGHAQYEKXAMELLKVSKDKRALKFLKRR 349
           +T + +  RP+  KG  T    FVR+L+REV G A YEK   ELLKV KDKRALK  KR+
Sbjct: 20  VTKRELPPRPSDRKGKSTKRVTFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRK 79

Query: 350 LGTHIRAKRKREELSNVLAQMR 415
           LGTH RAK+KREE++ VL +MR
Sbjct: 80  LGTHKRAKKKREEMAGVLRKMR 101


>04_04_1144 +
           31222556-31222633,31223238-31227665,31227724-31227789,
           31227790-31228014,31228097-31228255,31228393-31228551,
           31228855-31229013,31229371-31229490,31229604-31229825
          Length = 1871

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 21/76 (27%), Positives = 40/76 (52%)
 Frame = +2

Query: 179 KAISIRPASLKGLQTXHSKFVRDLVREVVGHAQYEKXAMELLKVSKDKRALKFLKRRLGT 358
           +A   + ASL+ +    S+  ++LV E +G    EK  +ELL +  +++  ++LK +   
Sbjct: 639 EAYQTKAASLEAVMESASEKEKELV-ESLGQITEEKKKLELLVLEYEEKTEEYLKEKQSL 697

Query: 359 HIRAKRKREELSNVLA 406
               +R + + S VLA
Sbjct: 698 E---ERLQSQESKVLA 710


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,203,039
Number of Sequences: 37544
Number of extensions: 210464
Number of successful extensions: 469
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 469
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)