Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_I02
(881 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR533465-1|CAG38496.1| 105|Homo sapiens RPL36 protein. 115 2e-25
BC091508-1|AAH91508.1| 105|Homo sapiens ribosomal protein L36 p... 115 2e-25
BC004971-1|AAH04971.1| 105|Homo sapiens ribosomal protein L36 p... 115 2e-25
BC003052-1|AAH03052.1| 105|Homo sapiens ribosomal protein L36 p... 115 2e-25
AB061833-1|BAB79471.1| 105|Homo sapiens ribosomal protein L36 p... 115 2e-25
AB046410-1|BAB21256.1| 32|Homo sapiens ribosomal protein L36 p... 64 8e-10
U82468-1|AAB53700.1| 542|Homo sapiens tubby related protein 1 T... 31 7.3
AF034923-1|AAB97966.1| 542|Homo sapiens tubby like protein 1 pr... 31 7.3
>CR533465-1|CAG38496.1| 105|Homo sapiens RPL36 protein.
Length = 105
Score = 115 bits (277), Expect = 2e-25
Identities = 58/90 (64%), Positives = 70/90 (77%)
Frame = +2
Query: 149 ISAGRKGLTAKAISIRPASLKGLQTXHSKFVRDLVREVVGHAQYEKXAMELLKVSKDKRA 328
++ G K +T R + +G T H+KFVRD++REV G A YE+ AMELLKVSKDKRA
Sbjct: 11 LNKGHK-VTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRA 69
Query: 329 LKFLKRRLGTHIRAKRKREELSNVLAQMRK 418
LKF+K+R+GTHIRAKRKREELSNVLA MRK
Sbjct: 70 LKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
>BC091508-1|AAH91508.1| 105|Homo sapiens ribosomal protein L36
protein.
Length = 105
Score = 115 bits (277), Expect = 2e-25
Identities = 58/90 (64%), Positives = 70/90 (77%)
Frame = +2
Query: 149 ISAGRKGLTAKAISIRPASLKGLQTXHSKFVRDLVREVVGHAQYEKXAMELLKVSKDKRA 328
++ G K +T R + +G T H+KFVRD++REV G A YE+ AMELLKVSKDKRA
Sbjct: 11 LNKGHK-VTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRA 69
Query: 329 LKFLKRRLGTHIRAKRKREELSNVLAQMRK 418
LKF+K+R+GTHIRAKRKREELSNVLA MRK
Sbjct: 70 LKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
>BC004971-1|AAH04971.1| 105|Homo sapiens ribosomal protein L36
protein.
Length = 105
Score = 115 bits (277), Expect = 2e-25
Identities = 58/90 (64%), Positives = 70/90 (77%)
Frame = +2
Query: 149 ISAGRKGLTAKAISIRPASLKGLQTXHSKFVRDLVREVVGHAQYEKXAMELLKVSKDKRA 328
++ G K +T R + +G T H+KFVRD++REV G A YE+ AMELLKVSKDKRA
Sbjct: 11 LNKGHK-VTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRA 69
Query: 329 LKFLKRRLGTHIRAKRKREELSNVLAQMRK 418
LKF+K+R+GTHIRAKRKREELSNVLA MRK
Sbjct: 70 LKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
>BC003052-1|AAH03052.1| 105|Homo sapiens ribosomal protein L36
protein.
Length = 105
Score = 115 bits (277), Expect = 2e-25
Identities = 58/90 (64%), Positives = 70/90 (77%)
Frame = +2
Query: 149 ISAGRKGLTAKAISIRPASLKGLQTXHSKFVRDLVREVVGHAQYEKXAMELLKVSKDKRA 328
++ G K +T R + +G T H+KFVRD++REV G A YE+ AMELLKVSKDKRA
Sbjct: 11 LNKGHK-VTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRA 69
Query: 329 LKFLKRRLGTHIRAKRKREELSNVLAQMRK 418
LKF+K+R+GTHIRAKRKREELSNVLA MRK
Sbjct: 70 LKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
>AB061833-1|BAB79471.1| 105|Homo sapiens ribosomal protein L36
protein.
Length = 105
Score = 115 bits (277), Expect = 2e-25
Identities = 58/90 (64%), Positives = 70/90 (77%)
Frame = +2
Query: 149 ISAGRKGLTAKAISIRPASLKGLQTXHSKFVRDLVREVVGHAQYEKXAMELLKVSKDKRA 328
++ G K +T R + +G T H+KFVRD++REV G A YE+ AMELLKVSKDKRA
Sbjct: 11 LNKGHK-VTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRA 69
Query: 329 LKFLKRRLGTHIRAKRKREELSNVLAQMRK 418
LKF+K+R+GTHIRAKRKREELSNVLA MRK
Sbjct: 70 LKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
>AB046410-1|BAB21256.1| 32|Homo sapiens ribosomal protein L36
protein.
Length = 32
Score = 63.7 bits (148), Expect = 8e-10
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = +2
Query: 302 LKVSKDKRALKFLKRRLGTHIRAKRKREELSN 397
LKVSKDKRALKF+K+R+GTHIRAKRKREELSN
Sbjct: 1 LKVSKDKRALKFIKKRVGTHIRAKRKREELSN 32
>U82468-1|AAB53700.1| 542|Homo sapiens tubby related protein 1
TULP1 protein.
Length = 542
Score = 30.7 bits (66), Expect = 7.3
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 122 CVKGHKTTXISAGRKGLTAKAISIRPASLKGLQTXHSKFVRD 247
C G K AGR+G + S PA + QT +++F+RD
Sbjct: 53 CPTGSKPRKPGAGRRGRPREEPSPDPAQARAPQTVYARFLRD 94
>AF034923-1|AAB97966.1| 542|Homo sapiens tubby like protein 1
protein.
Length = 542
Score = 30.7 bits (66), Expect = 7.3
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 122 CVKGHKTTXISAGRKGLTAKAISIRPASLKGLQTXHSKFVRD 247
C G K AGR+G + S PA + QT +++F+RD
Sbjct: 53 CPTGSKPRKPGAGRRGRPREEPSPDPAQARAPQTVYARFLRD 94
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,502,777
Number of Sequences: 237096
Number of extensions: 1094114
Number of successful extensions: 2123
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2123
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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