Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_H23
         (895 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       26   0.53 
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    25   0.93 
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    23   2.8  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    23   2.8  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     23   3.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.8  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   5.0  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
 Frame = +3

Query: 786 PAP-PXPXXPP--PXXPXPPXPXXXPXPXPPPPXP 881
           P P P P   P  P    PP P   P P  PP  P
Sbjct: 21  PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAP 55



 Score = 25.0 bits (52), Expect = 0.93
 Identities = 11/32 (34%), Positives = 11/32 (34%)
 Frame = +3

Query: 795 PXPXXPPPXXPXPPXPXXXPXPXPPPPXPXPP 890
           P P   P   P  P     P P   PP   PP
Sbjct: 21  PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPP 52



 Score = 22.6 bits (46), Expect = 5.0
 Identities = 11/41 (26%), Positives = 12/41 (29%)
 Frame = +2

Query: 773 PXXXPRPSLXXXPPPXXPXPPPXXXPXXPXXXPPXXXXXPP 895
           P   P+      PP     PPP   P  P    P      P
Sbjct: 27  PHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNPSQMMISP 67


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 25.0 bits (52), Expect = 0.93
 Identities = 12/34 (35%), Positives = 12/34 (35%)
 Frame = +3

Query: 774 PPXXPAPPXPXXPPPXXPXPPXPXXXPXPXPPPP 875
           PP  PA       P   P    P   P P PP P
Sbjct: 25  PPTRPARLRREAKPEAEPGNNRPIYIPQPRPPHP 58



 Score = 24.2 bits (50), Expect = 1.6
 Identities = 12/32 (37%), Positives = 12/32 (37%), Gaps = 2/32 (6%)
 Frame = +3

Query: 786 PAPPXPXX--PPPXXPXPPXPXXXPXPXPPPP 875
           P PP P     P   P    P   P P PP P
Sbjct: 109 PRPPHPRLRREPEAEPGNNRPVYIPQPRPPHP 140



 Score = 24.2 bits (50), Expect = 1.6
 Identities = 12/32 (37%), Positives = 12/32 (37%), Gaps = 2/32 (6%)
 Frame = +3

Query: 786 PAPPXPXX--PPPXXPXPPXPXXXPXPXPPPP 875
           P PP P     P   P    P   P P PP P
Sbjct: 135 PRPPHPRLRREPEAEPGNNRPVYIPQPRPPHP 166


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 11/34 (32%), Positives = 11/34 (32%)
 Frame = +3

Query: 774 PPXXPAPPXPXXPPPXXPXPPXPXXXPXPXPPPP 875
           PP  P        P   P    P   P P PP P
Sbjct: 24  PPTRPTRLRREAKPEAEPGNNRPVYIPQPRPPHP 57


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 11/34 (32%), Positives = 11/34 (32%)
 Frame = +3

Query: 774 PPXXPAPPXPXXPPPXXPXPPXPXXXPXPXPPPP 875
           PP  P        P   P    P   P P PP P
Sbjct: 25  PPTRPTRLRREAEPEAEPGNNRPVYIPQPRPPHP 58


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 305 RGXAVCVLGALPPSSLTDS 361
           +G  V +L ALPPSS+ ++
Sbjct: 519 KGETVGLLNALPPSSMKET 537


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -1

Query: 394  YRSPQPNDRAQRVSERGRRKSAQYANRXXPRXG 296
            Y  PQP +  Q  ++   +  +Q AN+  P  G
Sbjct: 997  YTPPQPANAQQGQAQAQAKPQSQEANKPKPATG 1029


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +3

Query: 864 PPPPXPXPPP 893
           PP P P PPP
Sbjct: 338 PPKPAPPPPP 347



 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +3

Query: 852 PXPXPPPPXP 881
           P P PPPP P
Sbjct: 339 PKPAPPPPPP 348


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,343
Number of Sequences: 438
Number of extensions: 4778
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)