Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_H21
         (893 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0678 + 27207340-27207447,27207555-27207668,27209111-272093...    54   1e-07
02_05_0144 + 26258841-26258948,26259099-26259212,26259335-262595...    54   1e-07
03_06_0282 - 32824950-32825135,32825247-32825505,32825651-328259...    54   2e-07
01_05_0337 + 21115388-21115961,21116471-21116597,21116683-211168...    36   0.043
02_01_0509 + 3694689-3695683,3695799-3695946,3696864-3696943,369...    28   8.7  

>04_04_0678 +
           27207340-27207447,27207555-27207668,27209111-27209332,
           27209407-27209481,27209569-27209685,27210145-27210395,
           27210686-27210761,27210862-27210948,27211037-27211222
          Length = 411

 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 27/83 (32%), Positives = 39/83 (46%)
 Frame = +1

Query: 529 LEIQFPLRRDSGDYEMILXYRAQHSTHRTPXXGGIRFSXDVTXXEXXALSXLMTFXXACV 708
           ++++  + +D G     + +R QH   R P  GGIR+  +V   E  AL+ LMT+  A  
Sbjct: 35  IKVECTIPKDDGTLASFIGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA 94

Query: 709 XXPXGGAXAGXXIXPXXXSXPXL 777
             P GGA  G    P   S   L
Sbjct: 95  AIPYGGAKGGIGCAPGELSTSEL 117


>02_05_0144 +
           26258841-26258948,26259099-26259212,26259335-26259556,
           26259660-26259734,26259827-26259943,26260046-26260296,
           26260833-26260908,26261045-26261131,26261216-26261401
          Length = 411

 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 27/83 (32%), Positives = 39/83 (46%)
 Frame = +1

Query: 529 LEIQFPLRRDSGDYEMILXYRAQHSTHRTPXXGGIRFSXDVTXXEXXALSXLMTFXXACV 708
           ++++  + +D G     + +R QH   R P  GGIR+  +V   E  AL+ LMT+  A  
Sbjct: 35  IKVECTIPKDDGTLATFVGFRVQHDNSRGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA 94

Query: 709 XXPXGGAXAGXXIXPXXXSXPXL 777
             P GGA  G    P   S   L
Sbjct: 95  AVPYGGAKGGIGCTPGELSRSEL 117


>03_06_0282 -
           32824950-32825135,32825247-32825505,32825651-32825901,
           32826309-32826425,32826613-32826687,32826788-32827009,
           32827396-32827509,32827694-32827801
          Length = 443

 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 27/83 (32%), Positives = 39/83 (46%)
 Frame = +1

Query: 529 LEIQFPLRRDSGDYEMILXYRAQHSTHRTPXXGGIRFSXDVTXXEXXALSXLMTFXXACV 708
           ++++  + +D G     + +R QH   R P  GGIR+  +V   E  AL+ LMT+  A  
Sbjct: 35  IKVECTIPKDDGTLASYVGFRVQHDNARGPMKGGIRYHHEVDPDEVNALAQLMTWKTAVA 94

Query: 709 XXPXGGAXAGXXIXPXXXSXPXL 777
             P GGA  G    P   S   L
Sbjct: 95  NIPYGGAKGGIGCSPGDLSISEL 117


>01_05_0337 +
           21115388-21115961,21116471-21116597,21116683-21116884,
           21117460-21117546,21117622-21117681,21117800-21117886,
           21118451-21118522,21118675-21118730,21118812-21118897,
           21119427-21119517,21119593-21119750,21119827-21119918,
           21120110-21120190,21120282-21120479
          Length = 656

 Score = 35.9 bits (79), Expect = 0.043
 Identities = 30/109 (27%), Positives = 42/109 (38%), Gaps = 1/109 (0%)
 Frame = +1

Query: 442 EDLKSRTPIEEKKKTVAGIL-KLMEPCDHILEIQFPLRRDSGDYEMILXYRAQHSTHRTP 618
           E + S  P+  K      IL +L+EP +     + P   D G+  +   +R Q S    P
Sbjct: 220 EVVHSLEPVLVKNSQHVQILERLLEP-ERCFIFRVPWVDDRGEAHVNRGFRVQFSQALGP 278

Query: 619 XXGGIRFSXDVTXXEXXALSXLMTFXXACVXXPXGGAXAGXXIXPXXXS 765
             GG+RF   +T      L+   T   A      GGA  G    P   S
Sbjct: 279 CRGGLRFHPSMTLSVAKFLAFEQTLKNALSQYKLGGAAGGSDFDPKGKS 327


>02_01_0509 + 3694689-3695683,3695799-3695946,3696864-3696943,
            3697214-3698062,3698193-3698337,3698426-3698677,
            3698780-3699089,3699415-3699524
          Length = 962

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +1

Query: 385  HMVEYFFHRACQVVEDKLVEDLKSRTPIEEKKKTVAGILKLMEPCDHILEIQFPLRRDS 561
            H    F   AC ++  KLV+ L     +EE+      +L L+      LE  +PL++D+
Sbjct: 882  HGCNTFQPLACSILATKLVDSLSYDRVLEERVLASLSLLNLVRH-PECLEKLYPLKKDT 939


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,025,209
Number of Sequences: 37544
Number of extensions: 367966
Number of successful extensions: 824
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)