Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_H21
         (893 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73899-2|CAA98074.1|  536|Caenorhabditis elegans Hypothetical pr...   135   3e-32
U28738-2|AAA68309.4|  982|Caenorhabditis elegans Hypothetical pr...    32   0.64 
AF000299-10|AAC47986.1|  338|Caenorhabditis elegans Seven tm rec...    30   1.9  
Z78016-5|CAB01442.2|  479|Caenorhabditis elegans Hypothetical pr...    30   2.6  

>Z73899-2|CAA98074.1|  536|Caenorhabditis elegans Hypothetical
           protein ZK829.4 protein.
          Length = 536

 Score =  135 bits (327), Expect = 3e-32
 Identities = 65/145 (44%), Positives = 94/145 (64%), Gaps = 1/145 (0%)
 Frame = +1

Query: 322 ASHEIPDKLKDIPTSANPKFFHMVEYFFHRACQVVEDKLVEDLKSRTPIE-EKKKTVAGI 498
           A  ++ D+ K +    NP F+ MV+++F++  +V+  KL E+LKS +  + +KK  V+GI
Sbjct: 24  AHSQVLDEQKPMEEQVNPSFYKMVDFYFNKGAEVIAPKLAEELKSNSLSQKDKKNLVSGI 83

Query: 499 LKLMEPCDHILEIQFPLRRDSGDYEMILXYRAQHSTHRTPXXGGIRFSXDVTXXEXXALS 678
           L  ++P + +L I FP+RRD+G++E+I  +RAQHS HRTP  GGIR+S DV   E  ALS
Sbjct: 84  LGAIKPVNKVLYITFPIRRDNGEFEVIEAWRAQHSEHRTPTKGGIRYSLDVCEDEVKALS 143

Query: 679 XLMTFXXACVXXPXGGAXAGXXIXP 753
            LMT+  A V  P GGA  G  I P
Sbjct: 144 ALMTYKCAVVDVPFGGAKGGVKIDP 168


>U28738-2|AAA68309.4|  982|Caenorhabditis elegans Hypothetical
           protein T28D9.7 protein.
          Length = 982

 Score = 31.9 bits (69), Expect = 0.64
 Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
 Frame = +1

Query: 241 KNSVQNEAL--NTMFRIIPAGVNVCCRTYASHEIPDKLKDIPTSANPKFFHMVEYFFHRA 414
           ++ V+ E L  N  F  +  G    C    S  I  + K     AN  FF + E  F+R 
Sbjct: 443 EDDVEQEELDENVSFSTVSGGETFSCED-KSRPITSEEK----KANQMFFLLDETAFNR- 496

Query: 415 CQVVEDKLVEDLKSR--TPIEEKKKTVAGILKLMEPCDHILEIQFPLRRDSGDY 570
                   V DLKSR    +++  + +A IL++ME   H+      +R  +GD+
Sbjct: 497 -NATRYMSVGDLKSRYGDKVDDVAEEIAVILRIMEKLWHVFMPDSYIRTMTGDF 549


>AF000299-10|AAC47986.1|  338|Caenorhabditis elegans Seven tm
           receptor protein 162 protein.
          Length = 338

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 609 VCGMLXAIA*YHFVIARIAPQRKLNLKNVIAWF 511
           +CG+L  +   HF+    A QRK NLK    W+
Sbjct: 95  ICGVLMPMFVVHFIFRYFAMQRKGNLKYFEGWY 127


>Z78016-5|CAB01442.2|  479|Caenorhabditis elegans Hypothetical
           protein R186.5 protein.
          Length = 479

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 196 WWLIMLSTTIGLGIGSPYTY 137
           WW I+  TTIG G  +P+TY
Sbjct: 368 WWAIVTMTTIGYGDITPHTY 387


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,828,178
Number of Sequences: 27780
Number of extensions: 320199
Number of successful extensions: 788
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)