Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_H11
         (845 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_03_0040 - 13999040-13999179,13999524-13999638,13999759-139998...    33   0.29 
05_07_0262 + 28769335-28769391,28769732-28769855,28770175-287702...    29   3.5  
01_05_0782 - 25148733-25149166,25149252-25149415,25149636-251496...    29   4.7  
12_01_0714 + 6223269-6226250                                           28   8.1  
10_08_0100 + 14788426-14789097                                         28   8.1  
05_07_0139 - 27968816-27968890,27969065-27969456,27969558-279696...    28   8.1  

>03_03_0040 -
           13999040-13999179,13999524-13999638,13999759-13999818,
           14000007-14000060,14000274-14000333,14000418-14000480,
           14000552-14000595,14000671-14000755,14000904-14001028,
           14001368-14001432,14001460-14001518,14001678-14001743,
           14001870-14001935,14002019-14002105,14002168-14002257,
           14002378-14002440,14003153-14003419
          Length = 502

 Score = 33.1 bits (72), Expect = 0.29
 Identities = 18/41 (43%), Positives = 25/41 (60%)
 Frame = +2

Query: 149 MTIRTSXNINGWLKLQXDSSYLARGSIKMSFGRICIGFTSG 271
           M I  +  I GWL L     +LA+G I + FGRI +GF++G
Sbjct: 151 MRISATICIFGWLSL-----HLAKGVIMLYFGRILLGFSTG 186


>05_07_0262 +
           28769335-28769391,28769732-28769855,28770175-28770266,
           28770673-28771078,28772057-28772184,28772273-28772332,
           28772814-28772963,28772999-28773061,28773062-28773217,
           28773361-28773572,28773698-28773796,28774343-28774512,
           28774592-28775040
          Length = 721

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
 Frame = +2

Query: 380 LKEFHWAKIPHDWADYEPDNAGGDENCILMYPDGNFADVXCTDTFQYVCYKXKTST---V 550
           LK  H A + H   D +P N   + NC L   D   A V   DT   V +    +T    
Sbjct: 221 LKYIHTASVYH--RDLKPKNILANSNCKLKICDFGLARVAFNDTPTTVFWTDYVATRWYR 278

Query: 551 AMSSCGXVXSEYT 589
           A   CG   S+YT
Sbjct: 279 APELCGSFFSKYT 291


>01_05_0782 -
           25148733-25149166,25149252-25149415,25149636-25149664,
           25150049-25150109,25150264-25150475,25150587-25150742,
           25150837-25150986,25151486-25151545,25151653-25151780,
           25152399-25152807,25153087-25153106,25153916-25154048
          Length = 651

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
 Frame = +2

Query: 380 LKEFHWAKIPHDWADYEPDNAGGDENCILMYPDGNFADVXCTDTFQYVCYKXKTST---V 550
           LK  H A + H   D +P N   + NC L   D   A V   DT   + +    +T    
Sbjct: 182 LKYIHTANVYH--RDLKPKNILANSNCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYR 239

Query: 551 AMSSCGXVXSEYT 589
           A   CG   S+YT
Sbjct: 240 APELCGSFFSKYT 252


>12_01_0714 + 6223269-6226250
          Length = 993

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -2

Query: 376  NGSLLSRITHEYQCRCHTNSSYLLSKTACCFLKLRXRGEANTDPS 242
            N +L+ RI   YQ    +NSS+ L  T  C L L  + +   +PS
Sbjct: 908  NNTLVGRIPDSYQFSTFSNSSF-LGNTGLCGLPLSRQCDNPEEPS 951


>10_08_0100 + 14788426-14789097
          Length = 223

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +2

Query: 431 PDNAGGDENCILMYPDGNFADVXCTDTFQY 520
           P  AGG E C+  YP+G  A     D  Q+
Sbjct: 53  PFTAGGHEWCVDFYPNGKLAAAGDADMIQF 82


>05_07_0139 -
           27968816-27968890,27969065-27969456,27969558-27969640,
           27969841-27969933,27970012-27970223,27970604-27970753,
           27971195-27971254,27971369-27971496,27972008-27972416,
           27973514-27973570
          Length = 552

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
 Frame = +2

Query: 380 LKEFHWAKIPHDWADYEPDNAGGDENCILMYPDGNFADVXCTDTFQYVCYKXKTST---V 550
           LK  H A + H   D +P N   + NC L   D   A V   DT   V +    +T    
Sbjct: 150 LKYIHTANVYH--RDLKPKNILANANCKLKICDFGLARVAFNDTPTTVFWTDYVATRWYR 207

Query: 551 AMSSCGXVXSEYTLSXQT 604
           A   CG   S+Y+ +  T
Sbjct: 208 APELCGSFFSKYSPAIDT 225


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,024,293
Number of Sequences: 37544
Number of extensions: 355760
Number of successful extensions: 698
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)