Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_H11
         (845 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00052-1|AAK95880.2|  308|Caenorhabditis elegans Hypothetical pr...    35   0.063
AL031627-2|CAA20953.1|  179|Caenorhabditis elegans Hypothetical ...    33   0.19 
AL031627-8|CAA20960.2|  222|Caenorhabditis elegans Hypothetical ...    33   0.34 
Z81542-2|CAB04416.1|  228|Caenorhabditis elegans Hypothetical pr...    30   2.4  
AL031627-7|CAA20959.2|  200|Caenorhabditis elegans Hypothetical ...    29   5.5  
AL110479-9|CAB60315.3|  583|Caenorhabditis elegans Hypothetical ...    28   7.3  
AF016671-2|AAB66113.1|  168|Caenorhabditis elegans Hypothetical ...    28   9.6  

>U00052-1|AAK95880.2|  308|Caenorhabditis elegans Hypothetical
           protein K02F3.5 protein.
          Length = 308

 Score = 35.1 bits (77), Expect = 0.063
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +2

Query: 410 HDWADYEPDNAGGDENCILMYPDGNFADVXCTDTFQYVCYK 532
           + W   +PDN   +ENC+ +   G + D  C  T  +VC K
Sbjct: 266 YKWGKKQPDNQEHNENCVEVDHSGQWTDKLCIITRPFVCKK 306


>AL031627-2|CAA20953.1|  179|Caenorhabditis elegans Hypothetical
           protein Y102A5C.7 protein.
          Length = 179

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +2

Query: 428 EPDNAGGDENCILMYPDGNFADVXC--TDTFQYVCYK 532
           EP+N GG E C+++   G  +D  C  TD   YVC K
Sbjct: 140 EPNNVGGTEQCLVLTWTGLMSDQTCARTDYVGYVCGK 176


>AL031627-8|CAA20960.2|  222|Caenorhabditis elegans Hypothetical
           protein Y102A5C.17 protein.
          Length = 222

 Score = 32.7 bits (71), Expect = 0.34
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +2

Query: 428 EPDNAGGDENCILMYPDGNFADVXC--TDTFQYVCYK 532
           EP+N GG E C+++   G  +D  C  TD   YVC K
Sbjct: 183 EPNNVGGMEQCLVLTWTGLMSDQTCARTDYVGYVCGK 219


>Z81542-2|CAB04416.1|  228|Caenorhabditis elegans Hypothetical
           protein F49A5.3 protein.
          Length = 228

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
 Frame = +2

Query: 410 HDWADYEPDNAGGDENCILMYPDG----NFADVXCTDTFQYVC 526
           H++A+  P+N  GD  CI     G    N+A+  CT+T  +VC
Sbjct: 59  HNFAEDHPNNEYGD--CIYYMTTGTQAGNWANGSCTETMSFVC 99


>AL031627-7|CAA20959.2|  200|Caenorhabditis elegans Hypothetical
           protein Y102A5C.16 protein.
          Length = 200

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +2

Query: 428 EPDNAGGDENCILMYPDGNFADVXCT--DTFQYVCYK 532
           EP+N   +E+C+LM   G  +D  CT  D   +VC K
Sbjct: 161 EPNNGSLNEHCLLMNWQGFMSDQFCTIPDYTGWVCGK 197


>AL110479-9|CAB60315.3|  583|Caenorhabditis elegans Hypothetical
           protein Y105C5B.11 protein.
          Length = 583

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = -3

Query: 165 EVRIVISKLLAPN*TNKNQSENKTFIWRFQYLHYK*QNCYSNLKNS 28
           +V +   KLLAP  TN    E      R QYLH     CYS ++ S
Sbjct: 63  DVVLYREKLLAPEVTNLVSREQMMMHPRDQYLHVLSPYCYSAIEVS 108


>AF016671-2|AAB66113.1|  168|Caenorhabditis elegans Hypothetical
           protein W09G10.5 protein.
          Length = 168

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
 Frame = +2

Query: 416 WADYEPDNAGGDENCILMYPDGNFADVXCTD--TFQYVCYKXKT 541
           W   EP+N GG     L+       DV CT   T  YVC K  T
Sbjct: 124 WNSGEPNNQGGQGCAKLITSSSVLDDVACTTELTNGYVCGKIAT 167


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,442,044
Number of Sequences: 27780
Number of extensions: 319603
Number of successful extensions: 632
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)