Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_H09
(893 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 44 1e-04
11_01_0750 - 6315126-6315896,6316371-6316784 40 0.004
01_01_1152 + 9170628-9171899 39 0.005
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 38 0.008
11_01_0771 + 6453130-6454488 38 0.011
11_02_0011 - 7337618-7338496,7338596-7338991 37 0.019
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 37 0.019
11_02_0012 - 7346282-7347136,7347234-7347593 36 0.043
11_01_0767 + 6438648-6438809,6439146-6440000 33 0.31
01_01_1013 - 8015552-8015613,8016898-8018035 30 2.2
11_02_0014 - 7352619-7352918,7353173-7353418 30 2.9
09_06_0317 - 22265786-22267618,22267874-22268446,22268546-222686... 30 2.9
02_02_0219 + 7985152-7985575,7985818-7985894,7986067-7986127,798... 28 8.7
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 44.4 bits (100), Expect = 1e-04
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Frame = +3
Query: 402 ANKIYVSDQYKLADAFSRT-ANLFRSEVDNINFSAPXNAADI-IHRWADEQTQGHXKTPV 575
AN ++V +L A++R A+ +R+E ++F A I+ W + T G K +
Sbjct: 102 ANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFESATAGRIKDFL 161
Query: 576 SEXXIDPXTAVAMFNVIFFXGXWHVPFNASXTXXXXF 686
+ +D T + N ++F G W F+A T F
Sbjct: 162 PKDAVDRATPAVLGNALYFKGDWESKFDARSTSDDVF 198
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 39.5 bits (88), Expect = 0.004
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 2/124 (1%)
Frame = +3
Query: 354 LLNQRYAEFDPKFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINF-SAPXNAADII 527
+L R P+ L A ++ L+ F A N++ S +F + P +A D I
Sbjct: 88 VLRDRSTSGGPR-LAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQI 146
Query: 528 HRWADEQTQGHXKTPVSEXXIDPXTAVAMFNVIFFXGXWHVPFNASXTXXXXFXXXXKTT 707
+ W + T+G T + ID T + + + ++F G W + T F T+
Sbjct: 147 NSWVKDSTKGTVTTLLPAGTIDQNTGLVLGSALYFRGRWLDRDDLRRTTEQKFYCLDGTS 206
Query: 708 IXXP 719
+ P
Sbjct: 207 VEVP 210
>01_01_1152 + 9170628-9171899
Length = 423
Score = 39.1 bits (87), Expect = 0.005
Identities = 18/74 (24%), Positives = 32/74 (43%)
Frame = +3
Query: 504 PXNAADIIHRWADEQTQGHXKTPVSEXXIDPXTAVAMFNVIFFXGXWHVPFNASXTXXXX 683
P A + ++ + + T+G + + +D T V + N + F G W +PF+ S T
Sbjct: 156 PEQARERVNAFVSDATEGLIRDVLPPNSVDSSTVVVLANAVHFKGTWSLPFHPSATFHAP 215
Query: 684 FXXXXKTTIXXPPM 725
F + P M
Sbjct: 216 FHLLDGGAVRAPFM 229
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 38.3 bits (85), Expect = 0.008
Identities = 19/70 (27%), Positives = 30/70 (42%)
Frame = +3
Query: 516 ADIIHRWADEQTQGHXKTPVSEXXIDPXTAVAMFNVIFFXGXWHVPFNASXTXXXXFXXX 695
A ++ W D T G K + +D T + + N ++F G W F+AS T F
Sbjct: 6 ASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFRLL 65
Query: 696 XKTTIXXPPM 725
++ P M
Sbjct: 66 DGKSVLAPFM 75
>11_01_0771 + 6453130-6454488
Length = 452
Score = 37.9 bits (84), Expect = 0.011
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = +3
Query: 525 IHRWADEQTQGHXKTPVSEXXIDPXTAVAMFNVIFFXGXWHVPFNASXTXXXXF 686
I+ WA T + + P TAV + N I+F G W PFN S T F
Sbjct: 177 INAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTERKPF 230
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 37.1 bits (82), Expect = 0.019
Identities = 23/107 (21%), Positives = 45/107 (42%), Gaps = 2/107 (1%)
Frame = +3
Query: 411 IYVSDQYKLADAF-SRTANLFRSEVDNINFSA-PXNAADIIHRWADEQTQGHXKTPVSEX 584
++ + +L A+ + A +++ NF P + I++W + T + +
Sbjct: 100 VWHDETLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWVSKATNKLIPEILPDG 159
Query: 585 XIDPXTAVAMFNVIFFXGXWHVPFNASXTXXXXFXXXXKTTIXXPPM 725
+ TA+ + N I+F G W PF S T F +++ P M
Sbjct: 160 SVHVDTALVLVNAIYFKGKWSNPFPRSSTTTGKFHRLDGSSVDVPFM 206
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 37.1 bits (82), Expect = 0.019
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +3
Query: 516 ADIIHRWADEQTQGHXKTPVSEXXIDPXTAVAMFNVIFFXGXWHVPFNASXTXXXXFXXX 695
A ++ W ++ T G K + +D T + + N ++F G W F+AS T F
Sbjct: 214 ASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFHLL 273
Query: 696 XKTTIXXPPM 725
++ P M
Sbjct: 274 DGKSVQAPFM 283
Score = 35.9 bits (79), Expect = 0.043
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = +3
Query: 525 IHRWADEQTQGHXKTPVSEXXIDPXTAVAMFNVIFFXGXWHVPFNASXTXXXXFXXXXKT 704
++ W D T G K + I+ T + + N ++F G W F+ S T F
Sbjct: 469 VNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTEDGEFHLLDGE 528
Query: 705 TIXXPPM 725
++ P M
Sbjct: 529 SVQAPFM 535
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 35.9 bits (79), Expect = 0.043
Identities = 17/74 (22%), Positives = 32/74 (43%)
Frame = +3
Query: 504 PXNAADIIHRWADEQTQGHXKTPVSEXXIDPXTAVAMFNVIFFXGXWHVPFNASXTXXXX 683
P ++ I++W + T + + + + TA+ + N I+F G W PF T
Sbjct: 121 PKSSRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERTTTGK 180
Query: 684 FXXXXKTTIXXPPM 725
F +++ P M
Sbjct: 181 FHRLDGSSVDAPFM 194
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 33.1 bits (72), Expect = 0.31
Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 2/106 (1%)
Frame = +3
Query: 414 YVSDQYKLADAF-SRTANLFRSEVDNINF-SAPXNAADIIHRWADEQTQGHXKTPVSEXX 587
++ Y L A+ ++ ++F + P A I+ W T+ +
Sbjct: 23 WLDASYSLKPAYRDAIVGTYKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPES 82
Query: 588 IDPXTAVAMFNVIFFXGXWHVPFNASXTXXXXFXXXXKTTIXXPPM 725
T + N I+F G W PF+ S T F +++ P M
Sbjct: 83 QSVDTRHVVGNAIYFKGEWLAPFDKSDTAEREFRRLDGSSVEVPFM 128
>01_01_1013 - 8015552-8015613,8016898-8018035
Length = 399
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 182 ILKESYNLADDKNVIASPLGVMLL-LSLXRVWSRCTVQGRDKGNPWGRGGSRVITHIRII 358
I K +++AD ++ S +L+ S+ +W+ V + PW GG+ V+ H I+
Sbjct: 153 ITKTIFHVADLHPIVGSDKAALLIYFSVPEIWATHVVDYPPRDRPW--GGNGVVVHKTIV 210
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/61 (22%), Positives = 23/61 (37%)
Frame = +3
Query: 504 PXNAADIIHRWADEQTQGHXKTPVSEXXIDPXTAVAMFNVIFFXGXWHVPFNASXTXXXX 683
P + I+ W + T + + + T + + N I+F G W PF T
Sbjct: 83 PKKSRKKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTGK 142
Query: 684 F 686
F
Sbjct: 143 F 143
>09_06_0317 -
22265786-22267618,22267874-22268446,22268546-22268677,
22268931-22269137,22269287-22269388,22270742-22271032
Length = 1045
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -3
Query: 336 TLEPPLPQGFPLSLPWTVHRLQTRXK 259
+L PPLP G PLS P+ QT K
Sbjct: 751 SLRPPLPPGLPLSSPFVCPTTQTSEK 776
>02_02_0219 +
7985152-7985575,7985818-7985894,7986067-7986127,
7986276-7986519,7986613-7987006,7987292-7987729
Length = 545
Score = 28.3 bits (60), Expect = 8.7
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = +3
Query: 315 GGGEAQESSHTYGLLNQRYAEFDPKFLTVANKIYVSDQYKLADAFSRTANLFRSEVDNIN 494
GGG E+S YGLL R + P T+ + + ++ + +S + N R E N +
Sbjct: 233 GGGLPPEASRLYGLLQHRQS---PAIATMQTLDFKNSSFRNQE-WSFSFNHQRKETMNPS 288
Query: 495 FSAPXNAADIIHRW 536
S+ AA I RW
Sbjct: 289 SSSSTTAA--IRRW 300
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,776,147
Number of Sequences: 37544
Number of extensions: 368782
Number of successful extensions: 887
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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