Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_H08
(1253 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 38 0.013
08_01_0059 - 394001-394708 33 0.47
10_02_0157 - 5954439-5954801,5956244-5956270,5956465-5956526,595... 31 1.4
07_03_1751 - 29215074-29216270 31 1.4
12_02_1174 - 26696869-26698191 31 1.9
11_01_0066 - 536281-537196,537397-537452 31 2.5
09_02_0369 - 8012470-8013120 30 3.3
06_01_0690 + 5033943-5034740 30 3.3
04_03_0904 + 20717005-20718087 30 3.3
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969... 26 3.9
12_02_0756 + 22839673-22839870,22839961-22842194,22842280-228425... 30 4.4
12_01_0927 + 9196230-9196427,9196499-9197190,9197317-9198351,919... 30 4.4
10_03_0023 - 7151465-7152111,7152222-7152405 30 4.4
07_03_0558 + 19461369-19462448 30 4.4
06_03_1211 - 28448429-28449295,28449825-28449860,28451010-284511... 30 4.4
04_02_0026 + 8708765-8710935,8711021-8711272,8711353-8711463,871... 30 4.4
01_01_0070 - 542603-542686,542803-543441 30 4.4
04_04_1414 - 33394518-33394847 25 4.8
10_08_0223 - 15986763-15987575 29 5.8
08_02_1084 - 24232968-24234779 29 7.7
07_03_0560 + 19479597-19480667 29 7.7
06_03_1506 + 30641428-30642168 29 7.7
05_03_0258 - 11153709-11156090 29 7.7
03_05_0587 - 25878948-25879201,25879290-25879361,25881091-25881451 29 7.7
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 38.3 bits (85), Expect = 0.013
Identities = 28/81 (34%), Positives = 30/81 (37%)
Frame = +1
Query: 1009 PPLPAHXXPXLRNAPPXITSPXTXRPXPRXSPHXXSSXPXLPSPXPLTXPXXSLSSLXLX 1188
PPLP P +APP P P P SP P PSP P T P S L
Sbjct: 1123 PPLPDGPPPLPLDAPPPPPLPEGPPPLPSDSP--PCQPPLPPSPPPATPPPPPPLSPSLP 1180
Query: 1189 XIXXPPXPQXAXXRXXPAXTP 1251
PP P + PA P
Sbjct: 1181 P-PPPPPPLPSGPPPQPAPPP 1200
Score = 30.3 bits (65), Expect = 3.3
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = +1
Query: 1009 PPLPAHXXPXLRNAPPXITSPXTXRPXPRXSPHXXSSXPXLPSPXPL 1149
PPLP P PP + SP P P P S P P+P PL
Sbjct: 1158 PPLPPSPPPATPPPPPPL-SPSLPPPPP--PPPLPSGPPPQPAPPPL 1201
Score = 29.5 bits (63), Expect = 5.8
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +1
Query: 1006 TPPLPAHXXPXLRNAPPXITSPXTXRPXPRXSPHXXSSXPXLPSPXP 1146
TPP P P L PP P P P P P P P P
Sbjct: 1168 TPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQPPPIPPPPVP 1214
>08_01_0059 - 394001-394708
Length = 235
Score = 33.1 bits (72), Expect = 0.47
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +1
Query: 1009 PPLPAHXXPXLRNAPPXITSPXTXRPXPRXSPH--XXSSXPXLPSPXPLTXP 1158
PP PA P R APP + P P P P+ S P P P ++ P
Sbjct: 11 PPPPATPPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPPSHPLAPPPPHISPP 62
>10_02_0157 - 5954439-5954801,5956244-5956270,5956465-5956526,
5956971-5957592
Length = 357
Score = 31.5 bits (68), Expect = 1.4
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +1
Query: 1006 TPPLPAHXXPXL-RNAPPXITSPXTXRPXPRXSPHXXSSXPXLPSPXPL 1149
TPP P P L PP + +P P P +P P LP P PL
Sbjct: 39 TPPAPTVVAPPLPTTPPPAVVAPSP--PLPPLTPPPAIVPPALPPPPPL 85
>07_03_1751 - 29215074-29216270
Length = 398
Score = 31.5 bits (68), Expect = 1.4
Identities = 33/128 (25%), Positives = 36/128 (28%), Gaps = 3/128 (2%)
Frame = -2
Query: 1249 GXGPAXXGGAXAGGG---EGXXXXXXGVXRGXXXAX*XXXXXXXXXXXRXXGGXGGGWGX 1079
G G GGA AGGG G G+ G GG GGG G
Sbjct: 252 GVGGGAGGGAGAGGGLGAGGGAGGGGGIGGGAGGGAGAGGGFGGGKGGGFGGGGGGGGGA 311
Query: 1078 GCXGR*WXGXRXEXXXXXXXXXXXXGXSLRXGGXXGGGTRGGXXXXRRXXTRXWGVGLXG 899
G G G GG GGG G +G G+ G
Sbjct: 312 GAGGGFGGGKGGGFGGGFGGGKGGGVGGGAGGGFGGGGGAGAGGGFGGGKGGGFGGGVGG 371
Query: 898 XVRGXSGG 875
G GG
Sbjct: 372 G-HGAGGG 378
>12_02_1174 - 26696869-26698191
Length = 440
Score = 31.1 bits (67), Expect = 1.9
Identities = 19/78 (24%), Positives = 24/78 (30%)
Frame = +1
Query: 1018 PAHXXPXLRNAPPXITSPXTXRPXPRXSPHXXSSXPXLPSPXPLTXPXXSLSSLXLXXIX 1197
P H P ++ PP P P P P S P + P P P S
Sbjct: 137 PPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPT 196
Query: 1198 XPPXPQXAXXRXXPAXTP 1251
PP + + P P
Sbjct: 197 RPPSVKPPVVQPKPQPPP 214
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 30.7 bits (66), Expect = 2.5
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = +1
Query: 1006 TPPLPAHXXPXLRNAPPXITSPXTXRPXPRXSPHXXSSXPXLPSPXPLT 1152
TPP A L A P S T P P P ++ P PSP P T
Sbjct: 199 TPPTIARPPRPLPPASPPPPSIATPPPSPASPPPPSTATPPPPSPTPTT 247
>09_02_0369 - 8012470-8013120
Length = 216
Score = 30.3 bits (65), Expect = 3.3
Identities = 19/74 (25%), Positives = 22/74 (29%)
Frame = +1
Query: 937 CXXXXAHPSSRXXXXXXXATXXXTPPLPAHXXPXLRNAPPXITSPXTXRPXPRXSPHXXS 1116
C HP A PP P H P L+ PP T +P P P
Sbjct: 16 CNLFCCHPKQHEPPPAPHAAATKPPPPPPHDDPPLK--PPPQQQFITAQPPPPDEPPLKP 73
Query: 1117 SXPXLPSPXPLTXP 1158
P+ P P
Sbjct: 74 PPSFYPAVLPPEPP 87
>06_01_0690 + 5033943-5034740
Length = 265
Score = 30.3 bits (65), Expect = 3.3
Identities = 31/124 (25%), Positives = 32/124 (25%)
Frame = -2
Query: 1243 GPAXXGGAXAGGGEGXXXXXXGVXRGXXXAX*XXXXXXXXXXXRXXGGXGGGWGXGCXGR 1064
G A GG GGG G G G GG GGG G G G
Sbjct: 65 GYASGGGGGGGGGGGGGNGGSGYGSGSGSGYGQAGGYGPYGGYAQGGGGGGGGGGGQNGG 124
Query: 1063 *WXGXRXEXXXXXXXXXXXXGXSLRXGGXXGGGTRGGXXXXRRXXTRXWGVGLXGXVRGX 884
G G G GGG GG G G G
Sbjct: 125 SGYGSGSGSGYGQAGGYGPYGGGAYAQGGGGGGGGGGGQNGGSGYGSGSGYGQAGGYGPY 184
Query: 883 SGGW 872
GG+
Sbjct: 185 GGGY 188
>04_03_0904 + 20717005-20718087
Length = 360
Score = 30.3 bits (65), Expect = 3.3
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = +1
Query: 1012 PLPAHXXPXLRNAPPXIT-SPXTXRPXPRXSPHXXSSXPXLPSPXPLTXP 1158
P P + N PP +P T +P P+ +P P+P P T P
Sbjct: 226 PPPTYKPQPKPNPPPTYKPAPPTYKPQPKPNPPPTYKPQPKPTPTPYTPP 275
>01_06_1678 - 39095986-39096205,39096400-39096477,39096578-39096949,
39097374-39097671,39097867-39098077,39098331-39099023
Length = 623
Score = 25.8 bits (54), Expect(2) = 3.9
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 1200 PSPPPAXAPPXXAGPHP 1250
P PPP PP PHP
Sbjct: 119 PPPPPPPHPPEDPPPHP 135
Score = 22.6 bits (46), Expect(2) = 3.9
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +3
Query: 1155 AXXXPLXTPXXXHXXPSPPPAXAP 1226
A P P H P PPP P
Sbjct: 69 APPTPSPVPEHLHHHPPPPPPVPP 92
>12_02_0756 + 22839673-22839870,22839961-22842194,22842280-22842531,
22842612-22842722,22842812-22842893,22843168-22843359
Length = 1022
Score = 29.9 bits (64), Expect = 4.4
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +1
Query: 991 ATXXXTPPLPAHXXPXLRNAPPXITSPXTXRPXPRXSPHXXSSXPXLPSPXPL 1149
AT P P P +PP + SP +P P SP S P LP+P P+
Sbjct: 565 ATAPAPPSPPEPPSPQHPPSPPPLRSPPR-QPTPPPSP---SQQPPLPTPQPV 613
>12_01_0927 + 9196230-9196427,9196499-9197190,9197317-9198351,
9198437-9198688,9198769-9198879,9198969-9199050,
9199325-9199516
Length = 853
Score = 29.9 bits (64), Expect = 4.4
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +1
Query: 1009 PPLPAHXXPXLRNAPPXITSPXTXRPXPRXSPHXXSSXPXLPSPXPLTXPXXSLS 1173
PP P H +PP + SP +P P SP S P LP+P P+ SL+
Sbjct: 407 PPSPRHPP-----SPPPLRSPPR-QPTPPPSP---SQQPPLPAPQPVQASPTSLA 452
>10_03_0023 - 7151465-7152111,7152222-7152405
Length = 276
Score = 29.9 bits (64), Expect = 4.4
Identities = 24/84 (28%), Positives = 29/84 (34%), Gaps = 2/84 (2%)
Frame = +1
Query: 1006 TPPLPAHXXPXLRN-APPXITSPXTXRPXPRXSPHXXSSXPXLPSPXPLTXPXXSLSSLX 1182
TP P+ P +PP I P T +P P P L P P P L +
Sbjct: 193 TPAPPSLVPPVFPTPSPPSILPPLTPQPPPSSLIPPVLPLPLLNPPPPPPPPPSLLPPVP 252
Query: 1183 LXXIXXPPXPQXAXXR-XXPAXTP 1251
L P P + R P TP
Sbjct: 253 LLPPLIPGVPPASASRSGRPVSTP 276
>07_03_0558 + 19461369-19462448
Length = 359
Score = 29.9 bits (64), Expect = 4.4
Identities = 35/129 (27%), Positives = 37/129 (28%), Gaps = 4/129 (3%)
Frame = -2
Query: 1249 GXGPAXXGGAXAGGGEGXXXXXXGVXRGXXXAX*XXXXXXXXXXXRXXGGXGGGWGXGCX 1070
G G GGA AGGG G G G GG GGG G G
Sbjct: 112 GQGGGFGGGAGAGGGAGGGLGGGGGFGGGGGGG-LGGGGGHGGGFGAGGGVGGGAGGGVG 170
Query: 1069 GR*WXGXRXEXXXXXXXXXXXXGXS----LRXGGXXGGGTRGGXXXXRRXXTRXWGVGLX 902
G G G + GG GGG GG + G G
Sbjct: 171 GGGGFGGGGGGGLGGGHGGGFGGGAGVGGGAGGGVGGGGGFGGGGGSGLGGGQGGGFGAG 230
Query: 901 GXVRGXSGG 875
G G GG
Sbjct: 231 GGAGGGIGG 239
>06_03_1211 -
28448429-28449295,28449825-28449860,28451010-28451135,
28452861-28453400
Length = 522
Score = 29.9 bits (64), Expect = 4.4
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2
Query: 991 RXGGXXGGGTRGGXXXXRRXXTRXWGVGLXGXVRGXSGG 875
R GG GGG++G RR GVG+ G GG
Sbjct: 43 RLGGGGGGGSKGANASTRRADNTCAGVGVGVGGGGGGGG 81
>04_02_0026 + 8708765-8710935,8711021-8711272,8711353-8711463,
8711553-8711634,8711909-8712100
Length = 935
Score = 29.9 bits (64), Expect = 4.4
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 994 TXXXTPPLPAHXX-PXLRNAPPXITSPXTXRPXPRXSPHXXSSXPXLPSPXPL 1149
T PP P P + +PP + SP +P P SP S P LP+P P+
Sbjct: 478 TAAPAPPSPPEPPSPRHQPSPPPLRSPPR-QPTPPPSP---SQQPPLPAPQPV 526
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 29.9 bits (64), Expect = 4.4
Identities = 26/90 (28%), Positives = 33/90 (36%), Gaps = 3/90 (3%)
Frame = +1
Query: 991 ATXXXTPPLPA-HXXPXLRNAPPXITSPXTXRPXPRXSPHXXSSXPXLP--SPXPLTXPX 1161
A TPP P P PP +T P P SP + P LP +P P+ P
Sbjct: 76 AVAPVTPPPPTPKKAPPPPVTPPPVTPPPV--TPPPVSPPPATPPPALPPSTPPPVAAPA 133
Query: 1162 XSLSSLXLXXIXXPPXPQXAXXRXXPAXTP 1251
+ ++ L PP A PA P
Sbjct: 134 EAPAA--LPPATTPPPVAEAPAELPPAEAP 161
>04_04_1414 - 33394518-33394847
Length = 109
Score = 25.0 bits (52), Expect(2) = 4.8
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 1105 GGXGGGWGXGCXG 1067
GG GGG G GC G
Sbjct: 91 GGGGGGGGGGCGG 103
Score = 23.4 bits (48), Expect(2) = 4.8
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 1243 GPAXXGGAXAGGGEG 1199
GPA GG GGG G
Sbjct: 85 GPACGGGGGGGGGGG 99
>10_08_0223 - 15986763-15987575
Length = 270
Score = 29.5 bits (63), Expect = 5.8
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = -2
Query: 1105 GGXGGGWGXGCXGR*WXGXRXEXXXXXXXXXXXXGXSLRXGGXXGGGTRGG 953
GG GGWG G G G GG GGGT GG
Sbjct: 47 GGTNGGWGSGSGAGAGAGYGESGGDSGNTWNYGRGGGAGGGGGGGGGTNGG 97
>08_02_1084 - 24232968-24234779
Length = 603
Score = 29.1 bits (62), Expect = 7.7
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = -2
Query: 997 SLRXGGXXGGGTRGGXXXXRRXXTRXWGVGLXGXVRGXSGGWR 869
S + GG GGG GG WG G G RG +G R
Sbjct: 298 SPQVGGNYGGGRGGGPGGGAGGGGGNWGRGGGGMGRGPAGNMR 340
>07_03_0560 + 19479597-19480667
Length = 356
Score = 29.1 bits (62), Expect = 7.7
Identities = 34/126 (26%), Positives = 38/126 (30%), Gaps = 1/126 (0%)
Frame = -2
Query: 1249 GXGPAXXGGAXAGGGEGXXXXXXGVXRGXXXAX*XXXXXXXXXXXRXXGGXGGGWGXGCX 1070
G G GG AGGG G G +G GG GG G G
Sbjct: 82 GGGGGFGGGGGAGGGGG---LGGGGGKGGGFGGGVGGGGGGEGGGLGGGGGGGLGGGGGG 138
Query: 1069 GR*WXGXRXEXXXXXXXXXXXXGXSLRXGGXXGGGTRG-GXXXXRRXXTRXWGVGLXGXV 893
G G + G GG GGG G G + G G G V
Sbjct: 139 GVGGGGGQGGGFGAGGGVGGGSGTGGGLGGGGGGGFGGDGGGGLGGGGGKEGGFGAGGGV 198
Query: 892 RGXSGG 875
G +GG
Sbjct: 199 GGGAGG 204
>06_03_1506 + 30641428-30642168
Length = 246
Score = 29.1 bits (62), Expect = 7.7
Identities = 34/127 (26%), Positives = 36/127 (28%), Gaps = 2/127 (1%)
Frame = -2
Query: 1249 GXGPAXXGGAXAGGGEGXXXXXXGVXRGXXXAX*XXXXXXXXXXXRXXGGXGGGWGXGCX 1070
G G GG GGG G G+ G GG GGG G G
Sbjct: 96 GSGNGGGGGGGYGGGGGGSYGSGGMGSGYGGGY---------GSGYDYGGQGGGGGHGGG 146
Query: 1069 GR*WXGXRXEXXXXXXXXXXXXGXSLRXGGXXGG--GTRGGXXXXRRXXTRXWGVGLXGX 896
G G G + GG GG G GG R G G G
Sbjct: 147 GGGGSGYGNGGYGSGFGEGYGSGGGVNGGGGSGGGGGGGGGASGYRYGAGYGKGYGYGGG 206
Query: 895 VRGXSGG 875
G GG
Sbjct: 207 PGGGGGG 213
>05_03_0258 - 11153709-11156090
Length = 793
Score = 29.1 bits (62), Expect = 7.7
Identities = 21/57 (36%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +1
Query: 1084 PXPRXSPHXXSSXPXLPSPXPLTXPXXSLSSLXLXXIXXPPXPQ-XAXXRXXPAXTP 1251
P R PH P P P P + L SL L PP PQ A R P TP
Sbjct: 19 PKKRPPPHTVL-LPATPPPPP-SRSSLPLDSLLLHLTAAPPPPQPPATRRPHPTPTP 73
>03_05_0587 - 25878948-25879201,25879290-25879361,25881091-25881451
Length = 228
Score = 29.1 bits (62), Expect = 7.7
Identities = 18/69 (26%), Positives = 23/69 (33%)
Frame = +1
Query: 1009 PPLPAHXXPXLRNAPPXITSPXTXRPXPRXSPHXXSSXPXLPSPXPLTXPXXSLSSLXLX 1188
PP+ P R APP P + P H S P P P S+ +
Sbjct: 134 PPVAFRRKPPAREAPP--PPPAAEKLSPPPQQHDDSDHNKRVGPLPRGSPPPYAQSVPVG 191
Query: 1189 XIXXPPXPQ 1215
PP P+
Sbjct: 192 PAAAPPPPR 200
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,074,403
Number of Sequences: 37544
Number of extensions: 271700
Number of successful extensions: 2783
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2495
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3876004116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -