Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_H08
(1253 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 34 0.18
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.42
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 31 1.7
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 31 2.3
AC024777-5|AAF60564.1| 506|Caenorhabditis elegans Hypothetical ... 31 2.3
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 30 4.0
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 5.2
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 29 9.1
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical protein
C34D4.11 protein.
Length = 136
Score = 34.3 bits (75), Expect = 0.18
Identities = 28/81 (34%), Positives = 28/81 (34%), Gaps = 2/81 (2%)
Frame = -2
Query: 1105 GGXGGGWGXGCXGR*WXGXRXE--XXXXXXXXXXXXGXSLRXGGXXGGGTRGGXXXXRRX 932
GG G GWG G G W G R G GG GGG GG
Sbjct: 49 GGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGG 108
Query: 931 XTRXWGVGLXGXVRGXSGGWR 869
R G G G RG GG R
Sbjct: 109 GGRGGGGG-GGGGRGGGGGGR 128
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein
E02A10.2 protein.
Length = 385
Score = 33.1 bits (72), Expect = 0.42
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -2
Query: 1249 GXGPAXXGGAXAGGGEGXXXXXXGVXRGXXXAX*XXXXXXXXXXXRXXGGXGGGWGXGCX 1070
G G GG GGG G G G GG GGG G GC
Sbjct: 75 GGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCG 134
Query: 1069 G 1067
G
Sbjct: 135 G 135
Score = 31.1 bits (67), Expect = 1.7
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = -2
Query: 1249 GXGPAXXGGAXAGGGEGXXXXXXGVXRGXXXAX*XXXXXXXXXXXRXXGGXGGGWGXGC 1073
G G GG GGG G G G GG GGG G GC
Sbjct: 132 GCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCGGGC 190
Score = 30.3 bits (65), Expect = 3.0
Identities = 28/101 (27%), Positives = 28/101 (27%), Gaps = 2/101 (1%)
Frame = -2
Query: 1249 GXGPAXXGGAXAGGGEGXXXXXXGVXRGXXXAX*XXXXXXXXXXXRXX--GGXGGGWGXG 1076
G G GG GGG G G G GG GGG G G
Sbjct: 81 GGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGG 140
Query: 1075 CXGR*WXGXRXEXXXXXXXXXXXXGXSLRXGGXXGGGTRGG 953
C G G G GG GGG GG
Sbjct: 141 CGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGG 181
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 31.1 bits (67), Expect = 1.7
Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 1/81 (1%)
Frame = +1
Query: 1012 PLPAHXXPXLRNAPPXITSPXTXRPXP-RXSPHXXSSXPXLPSPXPLTXPXXSLSSLXLX 1188
P+PA P + P +P RP P R +P+ P P+ P P + + +
Sbjct: 177 PVPARPTPYIERPVPARPAPYIERPEPARPAPYIERPVPARPA--PYIEPTPARPAPYIE 234
Query: 1189 XIXXPPXPQXAXXRXXPAXTP 1251
P P+ R P P
Sbjct: 235 PSTAKPQPRPQPPRTRPYVAP 255
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 30.7 bits (66), Expect = 2.3
Identities = 26/97 (26%), Positives = 31/97 (31%), Gaps = 5/97 (5%)
Frame = -2
Query: 982 GXXGGGTRGGXXXXRRXXTRXWGVGLXGXVRGXS-----GGWRXXXXWXXXGXEEPXKXX 818
G GGG RGG R G G G RG S GG R G +
Sbjct: 8 GRGGGGFRGGRGGGSGFTPRGGGGGFRGGDRGRSPGGFRGGDRGRSSSGFRGGDRGRSPG 67
Query: 817 XGXSXKQXXWKKRXRGGXXLWXRVXGWXGAGXVGGXW 707
++ + R RGG G+ G G W
Sbjct: 68 GFRGDREGGFSPRGRGGGFRGGDRGGFRGGDRGGSPW 104
>AC024777-5|AAF60564.1| 506|Caenorhabditis elegans Hypothetical
protein Y42H9AR.1 protein.
Length = 506
Score = 30.7 bits (66), Expect = 2.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 1129 LPSPXPLTXPXXSLSSLXLXXIXXPPXP 1212
+P P PL P SLSS+ + + PP P
Sbjct: 452 IPPPAPLNFPMPSLSSIGITQLATPPVP 479
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical protein
T28C6.1 protein.
Length = 281
Score = 30.3 bits (65), Expect = 3.0
Identities = 31/128 (24%), Positives = 35/128 (27%), Gaps = 1/128 (0%)
Frame = -2
Query: 1105 GGXGGGWGXGCXGR*WXGXRXEXXXXXXXXXXXXGXSLRXGGXXGGGTRGGXXXXRRXXT 926
GG GG G G G G + G GGG RGG +
Sbjct: 153 GGQNGGGGRGGSGG-QGGWGGSQDGGSQGGWGGQNGGGQGGNQGGGGGRGGNQGGEQGGW 211
Query: 925 RXWGVGLXGXVRGXSGGWRXXXXWXXXG-XEEPXKXXXGXSXKQXXWKKRXRGGXXLWXR 749
G G G GGW G + G + W RG W R
Sbjct: 212 GGQGGSQGGSQGGSQGGWGNQGGQQGGGRGGQQGPGGWGGGGRGGGWGGWGRGSRWGWGR 271
Query: 748 VXGWXGAG 725
W G G
Sbjct: 272 -PSWGGWG 278
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 3.0
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = -2
Query: 1240 PAXXGGAXAGGGEGXXXXXXGVXRGXXXAX*XXXXXXXXXXXRXXGGXGGGWGXGCXG 1067
PA GG GGG G G G GG GG G GC G
Sbjct: 76 PAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGG 133
Score = 29.5 bits (63), Expect = 5.2
Identities = 27/99 (27%), Positives = 28/99 (28%)
Frame = -2
Query: 1249 GXGPAXXGGAXAGGGEGXXXXXXGVXRGXXXAX*XXXXXXXXXXXRXXGGXGGGWGXGCX 1070
G G GG GGG G G G GG GGG G GC
Sbjct: 86 GGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCG-----GGGGGCGGGGGGCGGGGGGGCG 140
Query: 1069 GR*WXGXRXEXXXXXXXXXXXXGXSLRXGGXXGGGTRGG 953
G G GG GGG+ GG
Sbjct: 141 GGSSGGCGGGSSGGCGGGGGGGCGG-GGGGGCGGGSSGG 178
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 3.0
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = -2
Query: 1240 PAXXGGAXAGGGEGXXXXXXGVXRGXXXAX*XXXXXXXXXXXRXXGGXGGGWGXGCXG 1067
PA GG GGG G G G GG GG G GC G
Sbjct: 76 PAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGG 133
Score = 29.5 bits (63), Expect = 5.2
Identities = 27/99 (27%), Positives = 28/99 (28%)
Frame = -2
Query: 1249 GXGPAXXGGAXAGGGEGXXXXXXGVXRGXXXAX*XXXXXXXXXXXRXXGGXGGGWGXGCX 1070
G G GG GGG G G G GG GGG G GC
Sbjct: 86 GGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCG-----GGGGGCGGGGGGCGGGGGGGCG 140
Query: 1069 GR*WXGXRXEXXXXXXXXXXXXGXSLRXGGXXGGGTRGG 953
G G GG GGG+ GG
Sbjct: 141 GGSSGGCGGGSSGGCGGGGGGGCGG-GGGGGCGGGSSGG 178
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical protein
F13D12.3 protein.
Length = 245
Score = 29.9 bits (64), Expect = 4.0
Identities = 22/87 (25%), Positives = 29/87 (33%), Gaps = 3/87 (3%)
Frame = +1
Query: 916 PTP*XXPCXXXXAHPSSRXXXXXXXATXXXTPP--LPAHXXPXLRNA-PPXITSPXTXRP 1086
P P P P ++ PP PA P + PP +T P P
Sbjct: 87 PQPSYSPPKSSYGRPEPTYSPYSRPSSSYGRPPQFYPAQPGPAVPAVIPPVVTQPIVPPP 146
Query: 1087 XPRXSPHXXSSXPXLPSPXPLTXPXXS 1167
P S P +P+P P+ P S
Sbjct: 147 VPEVSEPVPE--PPIPAPGPVAPPTPS 171
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 5.2
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +1
Query: 1009 PPLPAHXXPXLRNAPPXITSPXTXRPXPRXSPHXXSSXPXLPSPXPLTXPXXS 1167
PP P P L PP I P P P P P + P P P S
Sbjct: 33 PPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYS 85
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical protein
Y49E10.10 protein.
Length = 425
Score = 28.7 bits (61), Expect = 9.1
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +1
Query: 994 TXXXTPPLPAHXXPXLRNAPPXITSPXTXRPXPRXSPHXXSSXPXLPSPXPLTXP 1158
T PP P APP P T P P + ++ +P P P+T P
Sbjct: 180 TKAPPPPTTKAPPPPTTKAPPP---PTTKAPPPPTTNKEVTTVAPVPKPAPVTAP 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,212,537
Number of Sequences: 27780
Number of extensions: 140612
Number of successful extensions: 852
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3485108972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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