Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_H07
         (871 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81017-3|CAB54257.1|  629|Caenorhabditis elegans Hypothetical pr...    28   10.0 
Z81017-2|CAB02672.1|  578|Caenorhabditis elegans Hypothetical pr...    28   10.0 
Z81017-1|CAB02669.1|  592|Caenorhabditis elegans Hypothetical pr...    28   10.0 
U80221-1|AAB38367.1|  579|Caenorhabditis elegans F58A3.1b protein.     28   10.0 
U80220-1|AAB38366.1|  592|Caenorhabditis elegans F58A3.1a protein.     28   10.0 
AL032637-18|CAE17998.1|  193|Caenorhabditis elegans Hypothetical...    28   10.0 

>Z81017-3|CAB54257.1|  629|Caenorhabditis elegans Hypothetical
           protein F58A3.1c protein.
          Length = 629

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 13/43 (30%), Positives = 15/43 (34%)
 Frame = +3

Query: 738 PPAPSXFPPXRXPXXFPPFXLXXRXPLSXXPPXXSPXPVXXXP 866
           PP PS       P   PP  +  + P S  PP     P    P
Sbjct: 518 PPMPSTMANQMPPPNLPPHTMSNQMPNSRMPPMQGQMPPSGMP 560


>Z81017-2|CAB02672.1|  578|Caenorhabditis elegans Hypothetical
           protein F58A3.1b protein.
          Length = 578

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 13/43 (30%), Positives = 15/43 (34%)
 Frame = +3

Query: 738 PPAPSXFPPXRXPXXFPPFXLXXRXPLSXXPPXXSPXPVXXXP 866
           PP PS       P   PP  +  + P S  PP     P    P
Sbjct: 467 PPMPSTMANQMPPPNLPPHTMSNQMPNSRMPPMQGQMPPSGMP 509


>Z81017-1|CAB02669.1|  592|Caenorhabditis elegans Hypothetical
           protein F58A3.1a protein.
          Length = 592

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 13/43 (30%), Positives = 15/43 (34%)
 Frame = +3

Query: 738 PPAPSXFPPXRXPXXFPPFXLXXRXPLSXXPPXXSPXPVXXXP 866
           PP PS       P   PP  +  + P S  PP     P    P
Sbjct: 481 PPMPSTMANQMPPPNLPPHTMSNQMPNSRMPPMQGQMPPSGMP 523


>U80221-1|AAB38367.1|  579|Caenorhabditis elegans F58A3.1b protein.
          Length = 579

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 13/43 (30%), Positives = 15/43 (34%)
 Frame = +3

Query: 738 PPAPSXFPPXRXPXXFPPFXLXXRXPLSXXPPXXSPXPVXXXP 866
           PP PS       P   PP  +  + P S  PP     P    P
Sbjct: 468 PPMPSTMANQMPPPNLPPHTMSNQMPNSRMPPMQGQMPPSGMP 510


>U80220-1|AAB38366.1|  592|Caenorhabditis elegans F58A3.1a protein.
          Length = 592

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 13/43 (30%), Positives = 15/43 (34%)
 Frame = +3

Query: 738 PPAPSXFPPXRXPXXFPPFXLXXRXPLSXXPPXXSPXPVXXXP 866
           PP PS       P   PP  +  + P S  PP     P    P
Sbjct: 481 PPMPSTMANQMPPPNLPPHTMSNQMPNSRMPPMQGQMPPSGMP 523


>AL032637-18|CAE17998.1|  193|Caenorhabditis elegans Hypothetical
           protein Y43F8C.20 protein.
          Length = 193

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
 Frame = -1

Query: 871 WXGXXXTGXGDXXGGXXESGXRXXRXK-GGXXXGXRXGGXQEGAGGXXQGXTXG 713
           W G    G G   GG      R      GG   G   GG + G GG   G   G
Sbjct: 125 WGGNNGGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGGGGGGG 178


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,141,348
Number of Sequences: 27780
Number of extensions: 57865
Number of successful extensions: 152
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)