Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_H04
         (807 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0163 - 26082276-26082369,26082751-26082814,26082899-260829...    33   0.20 
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           31   1.4  
04_03_0652 - 18424489-18424525,18424639-18424702,18424796-184248...    30   1.9  
11_04_0279 + 15722183-15722273,15722927-15722986,15724053-157243...    30   2.5  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    30   2.5  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   4.4  
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866...    28   7.6  
02_04_0382 - 22501041-22501279,22501717-22501810                       28   7.6  

>05_06_0163 -
           26082276-26082369,26082751-26082814,26082899-26082972,
           26083644-26083759,26084644-26084909,26085002-26085092
          Length = 234

 Score = 33.5 bits (73), Expect = 0.20
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 129 MNIFRLLGDLSHLLXINNMVXKXWKSXSCXG 221
           MN FR LGD++HL  +  ++ K + + SC G
Sbjct: 1   MNAFRFLGDMTHLFSVLVLLLKIYATKSCSG 31


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 15/38 (39%), Positives = 15/38 (39%)
 Frame = +2

Query: 656 GPPPPXXXXXPXXXXGXXPPXXXXXXXPPPXKXGXGGG 769
           GPPPP     P       PP       PPP   G GGG
Sbjct: 348 GPPPPPPPAAPA---APRPPGPGPGPPPPPGAAGRGGG 382


>04_03_0652 -
           18424489-18424525,18424639-18424702,18424796-18424869,
           18425809-18425924,18426078-18426343,18427659-18427749
          Length = 215

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 129 MNIFRLLGDLSHLLXINNMVXKXWKSXSCXG 221
           MN FRL GD++H++ +  ++ K     SC G
Sbjct: 1   MNAFRLAGDMTHIMSVLVLLLKIHTIKSCAG 31


>11_04_0279 +
           15722183-15722273,15722927-15722986,15724053-15724318,
           15724771-15724886,15725173-15725246,15725330-15725393,
           15725473-15725509
          Length = 235

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 129 MNIFRLLGDLSHLLXINNMVXKXWKSXSC 215
           MN FRL GD++HLL +  ++ K     SC
Sbjct: 1   MNAFRLAGDMTHLLSVVVLLLKIHTIKSC 29


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/42 (33%), Positives = 16/42 (38%)
 Frame = +3

Query: 477  GGSGAPPPPXXXGXGXXPXXXGXXXKKRXGGFSPPXXXGXXG 602
            G +G PPPP   G G           +  GG  PP   G  G
Sbjct: 1117 GITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLG 1158


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/45 (31%), Positives = 14/45 (31%)
 Frame = +2

Query: 659 PPPPXXXXXPXXXXGXXPPXXXXXXXPPPXKXGXGGGXXXXXXPP 793
           PPPP     P    G  PP       PPP     G        PP
Sbjct: 338 PPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPP 382



 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/33 (36%), Positives = 12/33 (36%)
 Frame = +2

Query: 659 PPPPXXXXXPXXXXGXXPPXXXXXXXPPPXKXG 757
           PPPP     P    G  PP       PPP   G
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKG 361


>09_04_0745 +
           19884868-19886000,19886110-19886309,19886422-19886666,
           19886880-19887668
          Length = 788

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 13/37 (35%), Positives = 14/37 (37%)
 Frame = +2

Query: 287 PXFPLXXGQKMGXTLXPPXXXFXGFFPLXGXPXXPPP 397
           P FPL     +     PP   F  F P    P  PPP
Sbjct: 44  PLFPLENAPALPPPPPPPPAPFFPFLPDSAPPQLPPP 80


>02_04_0382 - 22501041-22501279,22501717-22501810
          Length = 110

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/45 (31%), Positives = 14/45 (31%)
 Frame = +2

Query: 659 PPPPXXXXXPXXXXGXXPPXXXXXXXPPPXKXGXGGGXXXXXXPP 793
           PP P     P       PP       PPP     GGG      PP
Sbjct: 57  PPSPDYYDPPHSPDYYDPPPSPDYYDPPPSPYYGGGGGYGKPPPP 101


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,929,511
Number of Sequences: 37544
Number of extensions: 376660
Number of successful extensions: 891
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)