Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_G24
         (883 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3504|AAF46928.2| 1711|Drosophila melanogaster CG3820-PA...    30   4.9  
AY094967-1|AAM11320.1| 1711|Drosophila melanogaster SD07675p pro...    29   6.4  
AY071724-1|AAL49346.1|  121|Drosophila melanogaster RH40291p pro...    29   6.4  
AE014297-3068|AAF55934.1|  121|Drosophila melanogaster CG17820-P...    29   6.4  

>AE013599-3504|AAF46928.2| 1711|Drosophila melanogaster CG3820-PA
            protein.
          Length = 1711

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
 Frame = -3

Query: 596  PIMTEXXXXADVXXXGPNSFETIPPXERRVFLSRSHTPE--PVAVIPDLPPICLFISIAA 423
            P+ +     A       N F +IP  E  VF   +  P     A  PD PP  LF S A 
Sbjct: 1369 PVASPFQSAAKSPVSSANIFGSIPKAETSVFGGATTAPSNTTAAATPDAPPAGLFASAAI 1428

Query: 422  S 420
            S
Sbjct: 1429 S 1429


>AY094967-1|AAM11320.1| 1711|Drosophila melanogaster SD07675p protein.
          Length = 1711

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
 Frame = -3

Query: 596  PIMTEXXXXADVXXXGPNSFETIPPXERRVFLSRSHTPE--PVAVIPDLPPICLFISIAA 423
            P+ +     A       N F +IP  E  VF   +  P     A  PD PP  LF S A 
Sbjct: 1369 PVASPFQSAAKSPVSSGNIFGSIPKAETSVFGGATTAPSNTTAAATPDAPPAGLFASAAI 1428

Query: 422  S 420
            S
Sbjct: 1429 S 1429


>AY071724-1|AAL49346.1|  121|Drosophila melanogaster RH40291p
           protein.
          Length = 121

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
 Frame = +2

Query: 83  MNSKLLYFFATVLVCVNAE-VYWEDEEGYPVSGQFSKRHPRDVTW 214
           MNS L+    + L  V A  + W +E+        S  HP  V W
Sbjct: 1   MNSTLVILLLSALALVQARNIRWSEEDNSSQGPSLSHPHPHSVNW 45


>AE014297-3068|AAF55934.1|  121|Drosophila melanogaster CG17820-PA
           protein.
          Length = 121

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
 Frame = +2

Query: 83  MNSKLLYFFATVLVCVNAE-VYWEDEEGYPVSGQFSKRHPRDVTW 214
           MNS L+    + L  V A  + W +E+        S  HP  V W
Sbjct: 1   MNSTLVILLLSALALVQARNIRWSEEDNSSQGPSLSHPHPHSVNW 45


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,082,953
Number of Sequences: 53049
Number of extensions: 432639
Number of successful extensions: 741
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4291240668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)