Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_G09
         (859 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071751-1|AAL49373.2|  190|Drosophila melanogaster RH59211p pro...    59   9e-09
X99667-1|CAA67981.1|  178|Drosophila melanogaster mitochondrial ...    58   2e-08
AE014297-2623|AAN13796.1|  178|Drosophila melanogaster CG6030-PB...    58   2e-08
AE014297-2622|AAF55633.1|  178|Drosophila melanogaster CG6030-PA...    58   2e-08
DQ138650-1|ABA86256.1|  165|Drosophila melanogaster CG6030 protein.    51   2e-06
BT022484-1|AAY54900.1|  489|Drosophila melanogaster IP11785p pro...    31   1.5  
AE013599-140|AAF57285.3|  477|Drosophila melanogaster CG14593-PA...    31   1.5  

>AY071751-1|AAL49373.2|  190|Drosophila melanogaster RH59211p
           protein.
          Length = 190

 Score = 58.8 bits (136), Expect = 9e-09
 Identities = 26/41 (63%), Positives = 33/41 (80%)
 Frame = +3

Query: 96  RKMAKRISQSAVNWAALAERVPAEQKAHLAAFKIKSDNYLR 218
           R  A+RI+QS++NW+ALAERVPA QK+   AFK KSD Y+R
Sbjct: 12  RMAARRIAQSSINWSALAERVPANQKSSFGAFKTKSDIYVR 52



 Score = 29.1 bits (62), Expect = 8.2
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +2

Query: 314 PRLTGAVYKQAVPIPGMVDTFXK 382
           P++  A YK+ VP+ G+VD+F K
Sbjct: 62  PQIDWANYKKLVPVAGLVDSFQK 84


>X99667-1|CAA67981.1|  178|Drosophila melanogaster mitochondrial ATP
           synthase protein.
          Length = 178

 Score = 57.6 bits (133), Expect = 2e-08
 Identities = 25/38 (65%), Positives = 32/38 (84%)
 Frame = +3

Query: 105 AKRISQSAVNWAALAERVPAEQKAHLAAFKIKSDNYLR 218
           A+RI+QS++NW+ALAERVPA QK+   AFK KSD Y+R
Sbjct: 3   ARRIAQSSINWSALAERVPANQKSSFGAFKTKSDIYVR 40



 Score = 29.1 bits (62), Expect = 8.2
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +2

Query: 314 PRLTGAVYKQAVPIPGMVDTFXK 382
           P++  A YK+ VP+ G+VD+F K
Sbjct: 50  PQIDWANYKKLVPVAGLVDSFQK 72


>AE014297-2623|AAN13796.1|  178|Drosophila melanogaster CG6030-PB,
           isoform B protein.
          Length = 178

 Score = 57.6 bits (133), Expect = 2e-08
 Identities = 25/38 (65%), Positives = 32/38 (84%)
 Frame = +3

Query: 105 AKRISQSAVNWAALAERVPAEQKAHLAAFKIKSDNYLR 218
           A+RI+QS++NW+ALAERVPA QK+   AFK KSD Y+R
Sbjct: 3   ARRIAQSSINWSALAERVPANQKSSFGAFKTKSDIYVR 40



 Score = 29.1 bits (62), Expect = 8.2
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +2

Query: 314 PRLTGAVYKQAVPIPGMVDTFXK 382
           P++  A YK+ VP+ G+VD+F K
Sbjct: 50  PQIDWANYKKLVPVAGLVDSFQK 72


>AE014297-2622|AAF55633.1|  178|Drosophila melanogaster CG6030-PA,
           isoform A protein.
          Length = 178

 Score = 57.6 bits (133), Expect = 2e-08
 Identities = 25/38 (65%), Positives = 32/38 (84%)
 Frame = +3

Query: 105 AKRISQSAVNWAALAERVPAEQKAHLAAFKIKSDNYLR 218
           A+RI+QS++NW+ALAERVPA QK+   AFK KSD Y+R
Sbjct: 3   ARRIAQSSINWSALAERVPANQKSSFGAFKTKSDIYVR 40



 Score = 29.1 bits (62), Expect = 8.2
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +2

Query: 314 PRLTGAVYKQAVPIPGMVDTFXK 382
           P++  A YK+ VP+ G+VD+F K
Sbjct: 50  PQIDWANYKKLVPVAGLVDSFQK 72


>DQ138650-1|ABA86256.1|  165|Drosophila melanogaster CG6030 protein.
          Length = 165

 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 22/33 (66%), Positives = 27/33 (81%)
 Frame = +3

Query: 120 QSAVNWAALAERVPAEQKAHLAAFKIKSDNYLR 218
           QS++NW+ALAERVPA QK+   AFK KSD Y+R
Sbjct: 1   QSSINWSALAERVPANQKSSFGAFKTKSDIYVR 33



 Score = 29.1 bits (62), Expect = 8.2
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +2

Query: 314 PRLTGAVYKQAVPIPGMVDTFXK 382
           P++  A YK+ VP+ G+VD+F K
Sbjct: 43  PQIDWANYKKLVPVAGLVDSFQK 65


>BT022484-1|AAY54900.1|  489|Drosophila melanogaster IP11785p
           protein.
          Length = 489

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 19/57 (33%), Positives = 31/57 (54%)
 Frame = +3

Query: 102 MAKRISQSAVNWAALAERVPAEQKAHLAAFKIKSDNYLRRLXLASDVT*FFCFFGYH 272
           MAKR+  SA N       +P EQ++  +  + ++  ++ R+ +A  V  F CFF YH
Sbjct: 260 MAKRLHMSARN-------MPGEQQSMQSRTQARARLHVARMVVAFVVVFFICFFPYH 309


>AE013599-140|AAF57285.3|  477|Drosophila melanogaster CG14593-PA
           protein.
          Length = 477

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 19/57 (33%), Positives = 31/57 (54%)
 Frame = +3

Query: 102 MAKRISQSAVNWAALAERVPAEQKAHLAAFKIKSDNYLRRLXLASDVT*FFCFFGYH 272
           MAKR+  SA N       +P EQ++  +  + ++  ++ R+ +A  V  F CFF YH
Sbjct: 260 MAKRLHMSARN-------MPGEQQSMQSRTQARARLHVARMVVAFVVVFFICFFPYH 309


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,088,290
Number of Sequences: 53049
Number of extensions: 382538
Number of successful extensions: 651
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4126982652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)