Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_G06
(903 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0797 - 11296426-11297258,11297745-11297901 35 0.077
03_01_0299 - 2323945-2324422,2324542-2324671,2324763-2324898 34 0.13
01_06_0015 + 25586433-25586571,25586684-25587231 34 0.13
01_01_0181 - 1548392-1548466,1548689-1549379,1549475-1549604,154... 33 0.31
07_01_0365 + 2718707-2718839,2719335-2719405,2719512-2719955,272... 33 0.41
04_04_0990 - 29955207-29955551,29955639-29955813,29955887-299560... 32 0.54
05_01_0247 - 1844275-1844514,1847822-1848140,1848219-1848348,184... 31 0.95
01_02_0080 + 10933064-10933945 31 0.95
12_02_0063 + 13098519-13099585,13099759-13099906 31 1.3
03_02_0171 + 6126685-6127107,6127237-6127581,6127701-6127997,612... 30 2.9
10_08_1026 + 22400551-22401161,22401437-22401632,22401837-224018... 29 3.8
09_04_0594 - 18831011-18831360,18831562-18832111,18832364-188334... 29 5.1
06_03_1368 - 29612463-29612638,29613135-29613222,29613334-296134... 29 6.7
04_01_0058 + 592846-593185,594641-595182,596298-596987,597078-59... 29 6.7
02_04_0232 + 21130122-21130454,21130895-21131053,21131424-211315... 29 6.7
09_06_0072 - 20682424-20682870,20683928-20684854 28 8.8
04_04_0859 + 28805836-28805842,28806405-28806492,28807474-288075... 28 8.8
04_02_0026 + 8708765-8710935,8711021-8711272,8711353-8711463,871... 28 8.8
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 28 8.8
>03_02_0797 - 11296426-11297258,11297745-11297901
Length = 329
Score = 35.1 bits (77), Expect = 0.077
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 449 CRWRWLNP-RKSLNRRTVTPNDGLAVASTHDRLA*RW 342
CR RWLN R L R +TP + L + H R RW
Sbjct: 61 CRLRWLNYLRPDLRRGNITPQEQLLILELHSRWGNRW 97
>03_01_0299 - 2323945-2324422,2324542-2324671,2324763-2324898
Length = 247
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 476 TSMRSDLRLCRWRWLNP-RKSLNRRTVTPNDGLAVASTHDRLA*RW 342
T +R + CR RW+N R L R +TP++ + H L RW
Sbjct: 45 TGLRRSGKSCRLRWVNYLRPDLKRGKITPDEETVILQLHAMLGNRW 90
>01_06_0015 + 25586433-25586571,25586684-25587231
Length = 228
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 449 CRWRWLNP-RKSLNRRTVTPNDGLAVASTHDRLA*RW 342
CR RWLN R + R ++TP + + + H R RW
Sbjct: 55 CRLRWLNYLRPGVRRGSITPEEDMVIRELHSRWGNRW 91
>01_01_0181 -
1548392-1548466,1548689-1549379,1549475-1549604,
1549704-1549884
Length = 358
Score = 33.1 bits (72), Expect = 0.31
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 449 CRWRWLNPRK-SLNRRTVTPNDGLAVASTHDRLA*RW 342
CR RWLN K + R +TP + L + H R RW
Sbjct: 69 CRLRWLNYLKPDIKRGNLTPEEQLLILELHSRWGNRW 105
>07_01_0365 +
2718707-2718839,2719335-2719405,2719512-2719955,
2720660-2721802
Length = 596
Score = 32.7 bits (71), Expect = 0.41
Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Frame = +1
Query: 100 CAKNASASAQVA--SHSGVDSERANSMTIARVPPMWRSVRPAAEIANAYWSTSSCSK--S 267
C K A+ASA + G D RA + A + R A W T C
Sbjct: 403 CLKAAAASAGCGFCAAGGGDKLRAGACLAAAAAASNATARDACRGEGREWYTRGCPSRYG 462
Query: 268 WTACAPISVGSAALPPGSATKP 333
W A A +++ AA PG T P
Sbjct: 463 WLAMAGLALYIAAFSPGMGTVP 484
>04_04_0990 -
29955207-29955551,29955639-29955813,29955887-29956017,
29956317-29956436,29956908-29956984,29957070-29957316,
29957413-29957569,29958191-29958309,29958421-29958555,
29958636-29958921,29959009-29959211,29959732-29959881,
29960084-29960266,29960931-29961278
Length = 891
Score = 32.3 bits (70), Expect = 0.54
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2
Query: 422 KSLNRRTVTPNDGLAVASTHDRLA*RW*LMGLV 324
K +N +V+PNDGL + + DR A W L LV
Sbjct: 508 KDINSLSVSPNDGLVCSGSEDRTACIWKLPNLV 540
>05_01_0247 -
1844275-1844514,1847822-1848140,1848219-1848348,
1848706-1848883
Length = 288
Score = 31.5 bits (68), Expect = 0.95
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 470 MRSDLRLCRWRWLNP-RKSLNRRTVTPNDGLAVASTHDRLA*RW 342
+R + CR RWLN R + R +T ++ L + H R RW
Sbjct: 61 LRRTGKSCRLRWLNYLRPDVRRGNITADEQLLILDLHSRWGNRW 104
>01_02_0080 + 10933064-10933945
Length = 293
Score = 31.5 bits (68), Expect = 0.95
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = -2
Query: 494 RW--IRDQTSMRSDLRLCRWRWLNP-RKSLNRRTVTPNDGLAVASTHDRLA*RW 342
RW + +R + CR RWLN R + R TP + L + H R RW
Sbjct: 45 RWNELARAAGLRRTGKSCRLRWLNYLRPDVRRGDFTPQEQLLILELHFRWGNRW 98
>12_02_0063 + 13098519-13099585,13099759-13099906
Length = 404
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/75 (26%), Positives = 28/75 (37%)
Frame = +1
Query: 121 SAQVASHSGVDSERANSMTIARVPPMWRSVRPAAEIANAYWSTSSCSKSWTACAPISVGS 300
+AQ A + + +T + PP R P AE A + SV +
Sbjct: 188 AAQAAPQAPAPPRQVPVITQQQAPPQKRPAAPVAEPPCATKKMKGAVSAKPMAPQSSVTA 247
Query: 301 AALPPGSATKPISHH 345
+A PP A P HH
Sbjct: 248 SAAPPRCAVAPSQHH 262
>03_02_0171 +
6126685-6127107,6127237-6127581,6127701-6127997,
6129763-6129990,6130716-6131036
Length = 537
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/52 (26%), Positives = 20/52 (38%)
Frame = -1
Query: 570 KPXDPPRPHHQPSSPDSRRHRTRINSVDQGSDVHALRSAFVQVALVESPEES 415
K PPRP H+P + I V V A R F ++ + P +
Sbjct: 482 KAQHPPRPSHEPGGGREKEKHVLICRVKHSPSVAAKRQPFQEIGNISLPRHA 533
>10_08_1026 +
22400551-22401161,22401437-22401632,22401837-22401889,
22402369-22402819
Length = 436
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = -1
Query: 594 DSKWKSRCKPXDPPRPHHQPSSPDSRRHRTRINSVD--QGSDVHALRSAFVQVALVESPE 421
D +W P PP P + + + RR + VD GSD+ S+ V+ ++E
Sbjct: 120 DDEWGGDPAPPPPPPPVPEEDNEEERREELKRCLVDTVYGSDLGFRASSEVRGEVLELVT 179
Query: 420 ESESTN 403
+ E+TN
Sbjct: 180 QLEATN 185
>09_04_0594 -
18831011-18831360,18831562-18832111,18832364-18833406,
18833496-18833760,18835194-18835340,18835431-18835511,
18835626-18835804,18835935-18836093,18836269-18836398,
18836935-18837094,18837337-18837419,18837865-18837915,
18838035-18838151,18838273-18838359
Length = 1133
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -1
Query: 609 GAQPKDSKWKSRCKPXDPPRPHHQPSSPDSRRH 511
G+ P S R P DP P++QP + RH
Sbjct: 375 GSSPDSSPMSPREHPYDPNPPYYQPEGVELTRH 407
>06_03_1368 -
29612463-29612638,29613135-29613222,29613334-29613474,
29613561-29613595,29613990-29614054,29614286-29614335,
29614417-29614521,29614608-29614688,29614771-29614852,
29614941-29614995,29615111-29616164,29617202-29617289,
29617379-29617485,29617568-29617686,29617784-29617994
Length = 818
Score = 28.7 bits (61), Expect = 6.7
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -2
Query: 197 IGGTRAIVIEFARSLSTPLWEATCADAD 114
+GG R +V + +L +P+ +ATC+ AD
Sbjct: 741 LGGLRLLVYKVKLALESPVCQATCSTAD 768
>04_01_0058 +
592846-593185,594641-595182,596298-596987,597078-597233,
597277-597856,598601-598764,598907-599100,599702-599750,
599777-599806
Length = 914
Score = 28.7 bits (61), Expect = 6.7
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1
Query: 558 PPRPHHQPSSPDSR 517
PPRP+HQP P SR
Sbjct: 872 PPRPNHQPGMPGSR 885
>02_04_0232 +
21130122-21130454,21130895-21131053,21131424-21131582,
21132420-21132512,21133321-21133437,21133623-21133697,
21133878-21134104,21134200-21135073
Length = 678
Score = 28.7 bits (61), Expect = 6.7
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -1
Query: 522 SRRHRT-RINSVDQGSDVHALRSAFVQVALVESPEESESTNRHSK 391
SR++R+ R S++ GS + S F+ ESP S+ST RH K
Sbjct: 482 SRKNRSERQESLEPGSSGRS--SDFIDQDTTESPSGSKSTGRHHK 524
>09_06_0072 - 20682424-20682870,20683928-20684854
Length = 457
Score = 28.3 bits (60), Expect = 8.8
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
Frame = -1
Query: 558 PPRPHHQPSSPDSRRHRTRIN-SVDQGSDVHALRSAFVQVALVESPEE-----SESTNRH 397
PP P H PSS RR R R S+ Q D A F + + +E SE T+ H
Sbjct: 31 PPSPPHTPSSSTLRRRRPRRGWSLKQHEDDTAASPTFSDSSTITVVDEAVKPDSEETSSH 90
>04_04_0859 +
28805836-28805842,28806405-28806492,28807474-28807558,
28807638-28807763,28807819-28807968,28808497-28808541,
28808612-28808875,28809843-28809887,28810395-28810430,
28812048-28812816,28813063-28813925,28814024-28814182,
28814440-28814558,28815356-28815417,28816677-28816805,
28817395-28817460,28817757-28817890,28818025-28818162,
28818630-28818889,28818996-28819107,28819590-28819675,
28820655-28820735,28822841-28822928,28823222-28823260,
28823847-28823964,28824063-28824130,28824884-28824981,
28825238-28825397,28825691-28825816,28825876-28825945,
28826046-28826449
Length = 1664
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 313 PGSATKPISHHLQARRSCVDATAKPSFGVTVRRF 414
PG+ T+ + +HL+ D T + S+G + RF
Sbjct: 739 PGTLTRKLMYHLRDTYVAYDGTVRSSYGQQIVRF 772
>04_02_0026 +
8708765-8710935,8711021-8711272,8711353-8711463,
8711553-8711634,8711909-8712100
Length = 935
Score = 28.3 bits (60), Expect = 8.8
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 567 PXDPPRPHHQPSSPDSR 517
P +PP P HQPS P R
Sbjct: 486 PPEPPSPRHQPSPPPLR 502
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +2
Query: 281 HLSVSDQQRCH-PAAPPNPSVTI 346
H +S RCH P APPNP T+
Sbjct: 452 HKCLSPCHRCHGPIAPPNPEFTL 474
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,676,387
Number of Sequences: 37544
Number of extensions: 439452
Number of successful extensions: 2287
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2283
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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