Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_G06
(903 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81128-9|CAC42344.1| 239|Caenorhabditis elegans Hypothetical pr... 34 0.16
Z81128-8|CAB03402.1| 811|Caenorhabditis elegans Hypothetical pr... 34 0.16
AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical... 31 1.5
U80452-2|AAK68180.1| 729|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical pr... 29 3.4
U64836-4|AAG24059.1| 417|Caenorhabditis elegans Hypothetical pr... 29 6.0
U41027-2|AAV28335.1| 447|Caenorhabditis elegans Hypothetical pr... 29 6.0
U41027-1|AAV28336.1| 480|Caenorhabditis elegans Hypothetical pr... 29 6.0
L08403-7|AAA28019.2| 309|Caenorhabditis elegans Hypothetical pr... 29 6.0
>Z81128-9|CAC42344.1| 239|Caenorhabditis elegans Hypothetical
protein T23D8.9b protein.
Length = 239
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 314 PAAPPNPSVTIFKRGD-HASMLQPNRHLE*RFVDSDSSGDSTNATCTNAD 460
PA P PSV + +GD SML N + +F DS S +TC N +
Sbjct: 125 PAPPVAPSVMSYHQGDDRMSMLSVNTTMTNQFPDSQRCYSSNGSTCENVN 174
>Z81128-8|CAB03402.1| 811|Caenorhabditis elegans Hypothetical
protein T23D8.9a protein.
Length = 811
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 314 PAAPPNPSVTIFKRGD-HASMLQPNRHLE*RFVDSDSSGDSTNATCTNAD 460
PA P PSV + +GD SML N + +F DS S +TC N +
Sbjct: 125 PAPPVAPSVMSYHQGDDRMSMLSVNTTMTNQFPDSQRCYSSNGSTCENVN 174
>AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5b protein.
Length = 526
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = -1
Query: 612 HGAQPKDSKWKSRCKPXDPPR--PHHQPSSPDSRRHRTRINSVDQGSDVHALRSAFVQVA 439
H Q +D R P R H+ SP+ RRHR+ D A RS + A
Sbjct: 41 HYPQRRDMSPIRRSSAISPVRRSQDHRQRSPEVRRHRSPEKESKDAVDRDADRSNNI-AA 99
Query: 438 LVESPEESESTNRH 397
+++P S ST+ H
Sbjct: 100 RIQAPVVSSSTHHH 113
>U80452-2|AAK68180.1| 729|Caenorhabditis elegans Hypothetical
protein C16C8.2 protein.
Length = 729
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Frame = +1
Query: 139 HSGVDSERANSMTIA----RVPPMWRSVRPAAEIANAYWSTSSCSKSWTACAPISVGSAA 306
H V + N +T R+ W ++R NA W S+C K+ AC SV
Sbjct: 87 HCPVSCDFCNGITTCIDRHRLCGFWATIRECE--TNAVWMLSNCPKACKACKGRSVTLGG 144
Query: 307 LPPGSATK 330
PG K
Sbjct: 145 TGPGGTFK 152
>Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical protein
C14C10.5 protein.
Length = 1908
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 109 NASASAQVASHSGVD-SERANSMTIARVPPMWRSVRPAAEIANAYWSTSSCSKSWTACAP 285
N SAS VA+HSG S A+S ++A V + + R ++ ++C++S+ A P
Sbjct: 1623 NGSASLSVANHSGESMSHSASSASLAEVSEVKKQARLTLRAVISF-VFNTCNQSYDAYPP 1681
>U64836-4|AAG24059.1| 417|Caenorhabditis elegans Hypothetical
protein F10G2.3 protein.
Length = 417
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +1
Query: 196 MWRSVRPAAEIANAYWSTSSCS--KSWTACAPISVGSAALPPGSATKPI 336
M S RP + +A YW +SC+ +++ P + PP PI
Sbjct: 253 MVMSTRPPSPVAAGYWFGASCTDERNFICKRPAGLQCVGTPPSVTISPI 301
>U41027-2|AAV28335.1| 447|Caenorhabditis elegans Hypothetical
protein R08E3.4a protein.
Length = 447
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 318 QRHQTHQSPSSSEAIMRRCYSQTVIWSDGSSIQTLPGIQPTPPA 449
++H+ S SSS + SQT+ W DG T P + TPP+
Sbjct: 25 EKHENEHSRSSSGEMSN---SQTIEWGDGIQSST-PSPRSTPPS 64
>U41027-1|AAV28336.1| 480|Caenorhabditis elegans Hypothetical
protein R08E3.4b protein.
Length = 480
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 318 QRHQTHQSPSSSEAIMRRCYSQTVIWSDGSSIQTLPGIQPTPPA 449
++H+ S SSS + SQT+ W DG T P + TPP+
Sbjct: 25 EKHENEHSRSSSGEMSN---SQTIEWGDGIQSST-PSPRSTPPS 64
>L08403-7|AAA28019.2| 309|Caenorhabditis elegans Hypothetical
protein F42H10.9 protein.
Length = 309
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -1
Query: 558 PPRPHHQPSSPDSRRHRTRINSVDQGSDVHALRSA 454
PP H Q P RR N VD S V + R+A
Sbjct: 184 PPNGHQQQYQPQLRRKANTTNIVDVSSQVPSARNA 218
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,978,987
Number of Sequences: 27780
Number of extensions: 284119
Number of successful extensions: 1221
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1218
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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