Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_G05
         (893 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0417 - 3692247-3692329,3692442-3692504,3693233-3693350,369...    41   0.001
03_05_0107 - 20883353-20883627,20883739-20883801,20884608-208847...    41   0.002
04_04_1623 - 34846056-34846223,34846547-34846644,34846738-348468...    38   0.014
06_01_0108 - 860080-860162,860276-860338,860857-860974,861481-86...    37   0.019
07_03_0472 - 18519169-18519285,18519561-18519671,18520689-185208...    30   2.2  

>08_01_0417 -
           3692247-3692329,3692442-3692504,3693233-3693350,
           3694084-3694095
          Length = 91

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 23/49 (46%), Positives = 28/49 (57%)
 Frame = +2

Query: 116 MSLQEKFDQAAANVKNLKALPTYAQLLNLYAHFKQATVGDADPANRPGL 262
           M LQE F+Q A   K L    +    L LY  +KQATVGD + A RPG+
Sbjct: 1   MGLQEDFEQYAEKAKTLPESTSNENKLILYGLYKQATVGDVNTA-RPGI 48



 Score = 32.7 bits (71), Expect = 0.40
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +3

Query: 273 KGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLI 368
           + +AK+DAW  + G SKE+A   YI  V+ L+
Sbjct: 52  RDRAKWDAWKAVEGKSKEEAMSDYITKVKQLL 83


>03_05_0107 -
           20883353-20883627,20883739-20883801,20884608-20884725,
           20885012-20885023
          Length = 155

 Score = 40.7 bits (91), Expect = 0.002
 Identities = 22/49 (44%), Positives = 29/49 (59%)
 Frame = +2

Query: 116 MSLQEKFDQAAANVKNLKALPTYAQLLNLYAHFKQATVGDADPANRPGL 262
           M LQE F++ A  VK L    +    L LY  +KQATVGD +  +RPG+
Sbjct: 1   MGLQEDFEEYAEKVKTLPESTSNEDKLILYGLYKQATVGDVN-TSRPGI 48



 Score = 31.9 bits (69), Expect = 0.71
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +3

Query: 273 KGKAKFDAWHKLAGTSKEDAQKAYIEIVEGL 365
           + +AK+DAW  + G SKE+A   YI  V+ L
Sbjct: 52  RDRAKWDAWKAVEGKSKEEAMSDYITKVKQL 82


>04_04_1623 -
           34846056-34846223,34846547-34846644,34846738-34846829,
           34847096-34847202,34847385-34847490,34848108-34848547
          Length = 336

 Score = 37.5 bits (83), Expect = 0.014
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = +3

Query: 270 LKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGL 365
           LK +AK++AWHKL     E+A + YI +V+ L
Sbjct: 141 LKARAKWNAWHKLGAMPTEEAMQKYITVVDEL 172


>06_01_0108 -
           860080-860162,860276-860338,860857-860974,861481-861492
          Length = 91

 Score = 37.1 bits (82), Expect = 0.019
 Identities = 21/53 (39%), Positives = 28/53 (52%)
 Frame = +2

Query: 116 MSLQEKFDQAAANVKNLKALPTYAQLLNLYAHFKQATVGDADPANRPGLLELE 274
           M LQE+F++ A   K L    +    L LY  +KQATVG      RPG+  L+
Sbjct: 1   MGLQEEFEEFAEKAKTLPDTISNEDKLLLYGLYKQATVGPV-TTGRPGIFNLK 52



 Score = 35.1 bits (77), Expect = 0.076
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = +3

Query: 267 NLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLI 368
           NLK + K+DAW  + G SKE+A   YI  V+ L+
Sbjct: 50  NLKDRYKWDAWKAVEGKSKEEAMADYITKVKQLL 83


>07_03_0472 -
           18519169-18519285,18519561-18519671,18520689-18520816,
           18520965-18521147,18521337-18521427
          Length = 209

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = -3

Query: 327 PPSKCRPVCAKRQIWLYPSSSRRPGLLAGSASPTVACLKWAYKLRSWA 184
           PP++ RP          P+ +RR  L   SASP+     W Y + SW+
Sbjct: 137 PPAEARPRYLDTCDGPAPTPTRRIPLSGASASPSQMDQSWMYGIDSWS 184


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,848,026
Number of Sequences: 37544
Number of extensions: 335669
Number of successful extensions: 588
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)