Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_G05
         (893 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme...    54   2e-07
Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical pr...    45   6e-05
Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical pr...    40   0.003
U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical pr...    34   0.12 
AL023828-1|CAA19448.1|  115|Caenorhabditis elegans Hypothetical ...    33   0.36 
Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily a...    28   7.8  

>AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 1 protein.
          Length = 86

 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 26/48 (54%), Positives = 34/48 (70%)
 Frame = +2

Query: 134 FDQAAANVKNLKALPTYAQLLNLYAHFKQATVGDADPANRPGLLELEG 277
           FD AAA VK LK  P+  +LL LYA FKQ TVGD +  ++PG+ +L+G
Sbjct: 5   FDDAAATVKTLKTSPSNDELLKLYALFKQGTVGD-NTTDKPGMFDLKG 51



 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 22/38 (57%), Positives = 29/38 (76%)
 Frame = +3

Query: 267 NLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIASIG 380
           +LKGKAK+ AW +  G +K+DAQKAY+ +VE LIA  G
Sbjct: 48  DLKGKAKWSAWDEKKGLAKDDAQKAYVALVEELIAKYG 85


>Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical
           protein R06F6.9 protein.
          Length = 385

 Score = 45.2 bits (102), Expect = 6e-05
 Identities = 24/55 (43%), Positives = 30/55 (54%)
 Frame = +2

Query: 113 SMSLQEKFDQAAANVKNLKALPTYAQLLNLYAHFKQATVGDADPANRPGLLELEG 277
           S S Q  F++A  N+K LK  P     L LY  FKQAT GD     RPG+++  G
Sbjct: 22  SFSAQADFEKAQKNLKTLKEEPDNDVKLQLYGLFKQATAGDVQ-GKRPGMMDFVG 75



 Score = 37.5 bits (83), Expect = 0.013
 Identities = 14/32 (43%), Positives = 25/32 (78%)
 Frame = +3

Query: 276 GKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIA 371
           G+AK+DAW+ L G ++++A+  Y ++V GLI+
Sbjct: 75  GRAKYDAWNTLKGQTQDEARANYAKLVGGLIS 106


>Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical
           protein F47B10.7 protein.
          Length = 116

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
 Frame = +2

Query: 116 MSLQEKFDQAAANVKNLKALPTYA----QLLNLYAHFKQATVGDADPANRPGLLEL 271
           MSLQEKFD A   ++ L      A    Q L  Y+ FKQA++GD +  +RPG+  +
Sbjct: 1   MSLQEKFDAAVEIIQKLPKTGPVATSNDQKLTFYSLFKQASIGDVN-TDRPGIFSI 55



 Score = 29.5 bits (63), Expect = 3.4
 Identities = 10/33 (30%), Positives = 22/33 (66%)
 Frame = +3

Query: 279 KAKFDAWHKLAGTSKEDAQKAYIEIVEGLIASI 377
           + K+D+W +L G S+++A++ YI+ +  +   I
Sbjct: 58  RKKWDSWKELEGVSQDEAKERYIKALNDMFDKI 90


>U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical
           protein F26A1.15 protein.
          Length = 219

 Score = 34.3 bits (75), Expect = 0.12
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +3

Query: 270 LKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGL 365
           + G  K+ AW+K  G +KE+A + Y+E V+ L
Sbjct: 157 INGNEKWHAWNKCRGLTKEEASEQYVEAVQKL 188


>AL023828-1|CAA19448.1|  115|Caenorhabditis elegans Hypothetical
           protein Y17G7B.1 protein.
          Length = 115

 Score = 32.7 bits (71), Expect = 0.36
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = +2

Query: 134 FDQAAANVKNLKALPTYAQLLNLYAHFKQATVGD 235
           F+ AA  ++ LK+ PT  + L LYA +KQA  GD
Sbjct: 15  FEIAAEEMRRLKSEPTDRERLKLYALYKQALHGD 48


>Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical
           protein C18D11.2 protein.
          Length = 266

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 15/46 (32%), Positives = 30/46 (65%)
 Frame = +3

Query: 261 F*NLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIASIGLKE*KT 398
           F +++G  K++AW+KL   + ++A++AY++ +   I  +  KE KT
Sbjct: 49  FYDIQGVYKWNAWNKLDNMTMDEAKQAYVDSIVQKIREV-QKEYKT 93


>AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 168 protein.
          Length = 1347

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
 Frame = +3

Query: 72  TGVSSSNKLPTFDQVCLSKKNLTKPQPT*RT*K-LFQLMPNSLTCMPISNRPQLEMPIQP 248
           T  S+S   PT D + L  ++    +P  R  + LFQ +P  L   P  N PQLE+ +QP
Sbjct: 16  TTSSASTVPPTSDALLLQLRS----RPNSRVFRALFQYLP--LRDSPNEN-PQLELSLQP 68

Query: 249 IDLVF*NLKGKAKFDAWH 302
            D+V   +KG+   D ++
Sbjct: 69  GDVVL--VKGEMDSDGFY 84


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,167,857
Number of Sequences: 27780
Number of extensions: 291296
Number of successful extensions: 490
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 489
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)