Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_G02
         (851 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084153-7|AAK84593.1|  451|Caenorhabditis elegans Hypothetical ...    29   3.2  
Z98877-5|CAD56616.1|  731|Caenorhabditis elegans Hypothetical pr...    28   9.7  
Z98877-4|CAB54473.2|  796|Caenorhabditis elegans Hypothetical pr...    28   9.7  
AC024790-13|AAL32247.1|  311|Caenorhabditis elegans Hypothetical...    28   9.7  

>AC084153-7|AAK84593.1|  451|Caenorhabditis elegans Hypothetical
           protein Y22D7AL.4 protein.
          Length = 451

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +3

Query: 225 PEVEAALRTFGNCLKGLVDLNGFLKKPEIEEAKPN 329
           PE E  +RT G+   G++D+NG   +P  + A+PN
Sbjct: 64  PEFEVEIRTNGHIYAGILDING--AEPGDKGAEPN 96


>Z98877-5|CAD56616.1|  731|Caenorhabditis elegans Hypothetical
           protein Y69H2.3c protein.
          Length = 731

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +3

Query: 189 SQCTKNNAEDKVPEVEAALRTFGNCLKGLVDLNGFLKKPEIEEAKP 326
           S C    +EDK P +  ++    +C +G    +G+L+  + E  KP
Sbjct: 500 SDCLNTCSEDKCPGMSKSMMCTKHCGQGCACASGYLRSSDGECYKP 545


>Z98877-4|CAB54473.2|  796|Caenorhabditis elegans Hypothetical
           protein Y69H2.3b protein.
          Length = 796

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +3

Query: 189 SQCTKNNAEDKVPEVEAALRTFGNCLKGLVDLNGFLKKPEIEEAKP 326
           S C    +EDK P +  ++    +C +G    +G+L+  + E  KP
Sbjct: 565 SDCLNTCSEDKCPGMSKSMMCTKHCGQGCACASGYLRSSDGECYKP 610


>AC024790-13|AAL32247.1|  311|Caenorhabditis elegans Hypothetical
           protein Y47D7A.13 protein.
          Length = 311

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 30/116 (25%), Positives = 38/116 (32%)
 Frame = -2

Query: 847 GXGGXGGVFLXAGXXWXXXDXPPXFXGGXXGWGKHFXGGDFXGXQGG*XFXSXFGGXFFQ 668
           G    GG +  AG         P   GG    G    GG F G QGG       GG    
Sbjct: 62  GYAQPGGGYGGAGGFGGAYQAAPAIGGGGSYAGAGPIGGGFGGAQGGYAGAGPIGGG--A 119

Query: 667 XRGXS*WGDXPXXGXXFVSKFXXXXXGXXSSLLXGXHSGPXSGDEQSKTGXPVXGS 500
             G +  G  P  G    ++      G       G ++GP  G    + G P  G+
Sbjct: 120 QGGYA--GAGPIGGG---AQGGYAGAGPIGGGAQGGYAGPIGGGAGYQGGAPAQGA 170


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,221,027
Number of Sequences: 27780
Number of extensions: 251070
Number of successful extensions: 560
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)