Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_F19
(915 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.5
Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical pr... 25 1.9
AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical... 25 1.9
Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical pr... 25 1.9
AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical... 25 1.9
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 25 2.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 25 2.4
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 29 3.5
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 25 4.6
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 24 6.5
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 28 8.1
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 28 8.1
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 23 8.6
AF125971-9|AAD14764.1| 442|Caenorhabditis elegans Hypothetical ... 23 9.1
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.7 bits (66), Expect = 1.5
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1
Query: 865 PXXPXXPPPPLXPPPXP 915
P P PPPP+ PPP P
Sbjct: 63 PPPPPPPPPPMCPPPPP 79
>Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 25.4 bits (53), Expect(2) = 1.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 882 PSPPPXPPPXP 914
P PPP PPP P
Sbjct: 266 PPPPPPPPPKP 276
Score = 23.4 bits (48), Expect(2) = 1.9
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 864 PLXPXXPSPPPXPPP 908
P P PPP PPP
Sbjct: 259 PREKSVPPPPPPPPP 273
>AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 25.4 bits (53), Expect(2) = 1.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 882 PSPPPXPPPXP 914
P PPP PPP P
Sbjct: 266 PPPPPPPPPKP 276
Score = 23.4 bits (48), Expect(2) = 1.9
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 864 PLXPXXPSPPPXPPP 908
P P PPP PPP
Sbjct: 259 PREKSVPPPPPPPPP 273
>Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 25.4 bits (53), Expect(2) = 1.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 882 PSPPPXPPPXP 914
P PPP PPP P
Sbjct: 251 PPPPPPPPPKP 261
Score = 23.4 bits (48), Expect(2) = 1.9
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 864 PLXPXXPSPPPXPPP 908
P P PPP PPP
Sbjct: 244 PREKSVPPPPPPPPP 258
>AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 25.4 bits (53), Expect(2) = 1.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 882 PSPPPXPPPXP 914
P PPP PPP P
Sbjct: 251 PPPPPPPPPKP 261
Score = 23.4 bits (48), Expect(2) = 1.9
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 864 PLXPXXPSPPPXPPP 908
P P PPP PPP
Sbjct: 244 PREKSVPPPPPPPPP 258
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 25.0 bits (52), Expect(2) = 2.4
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 864 PLXPXXPSPPPXPPP 908
P+ P PPP PPP
Sbjct: 624 PISSAAPPPPPPPPP 638
Score = 23.4 bits (48), Expect(2) = 8.6
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 885 SPPPXPPPXP 914
+PPP PPP P
Sbjct: 629 APPPPPPPPP 638
Score = 23.4 bits (48), Expect(2) = 2.4
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 885 SPPPXPPPXP 914
+PPP PPP P
Sbjct: 648 APPPPPPPPP 657
Score = 23.0 bits (47), Expect(2) = 8.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 882 PSPPPXPPP 908
P PPP PPP
Sbjct: 609 PPPPPPPPP 617
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 25.0 bits (52), Expect(2) = 2.4
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 864 PLXPXXPSPPPXPPP 908
P+ P PPP PPP
Sbjct: 450 PISSAAPPPPPPPPP 464
Score = 23.4 bits (48), Expect(2) = 8.8
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 885 SPPPXPPPXP 914
+PPP PPP P
Sbjct: 455 APPPPPPPPP 464
Score = 23.4 bits (48), Expect(2) = 2.4
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 885 SPPPXPPPXP 914
+PPP PPP P
Sbjct: 474 APPPPPPPPP 483
Score = 23.0 bits (47), Expect(2) = 8.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 882 PSPPPXPPP 908
P PPP PPP
Sbjct: 435 PPPPPPPPP 443
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 873 PXXPSPPPXPPPXP 914
P PSPPP PPP P
Sbjct: 135 PPPPSPPPPPPPPP 148
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 24.6 bits (51), Expect(2) = 4.6
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 864 PLXPXXPSPPPXPPP 908
P+ P PPP PPP
Sbjct: 45 PMCGCAPPPPPPPPP 59
Score = 23.0 bits (47), Expect(2) = 4.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 888 PPPXPPPXP 914
PPP PPP P
Sbjct: 52 PPPPPPPPP 60
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 864 PLXPXXPSPPPXPPPXP 914
P P P PPP PPP P
Sbjct: 354 PPAPPPPPPPPPPPPPP 370
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 865 PXXPXXPPPPLXPPPXP 915
P P PPPP PPP P
Sbjct: 354 PPAPPPPPPPPPPPPPP 370
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 23.8 bits (49), Expect(2) = 6.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 864 PLXPXXPSPPPXPP 905
PL P+PPP PP
Sbjct: 530 PLSTGAPTPPPPPP 543
Score = 23.0 bits (47), Expect(2) = 6.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 882 PSPPPXPPP 908
P PPP PPP
Sbjct: 577 PPPPPPPPP 585
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 28.3 bits (60), Expect = 8.1
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 874 PXXPPPPLXPPPXP 915
P PPPP+ PPP P
Sbjct: 784 PVPPPPPVPPPPPP 797
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 864 PLXPXXPSPPPXPPPXP 914
PL P PPP PPP P
Sbjct: 821 PLSTLPPPPPPNPPPAP 837
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 23.4 bits (48), Expect(2) = 8.6
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 885 SPPPXPPPXP 914
+PPP PPP P
Sbjct: 83 APPPPPPPPP 92
Score = 23.0 bits (47), Expect(2) = 8.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 882 PSPPPXPPP 908
P PPP PPP
Sbjct: 67 PPPPPPPPP 75
>AF125971-9|AAD14764.1| 442|Caenorhabditis elegans Hypothetical
protein Y4C6B.1 protein.
Length = 442
Score = 23.4 bits (48), Expect(2) = 9.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 867 LXPXXPSPPPXPPP 908
L P +PPP PPP
Sbjct: 308 LAPMCMAPPPPPPP 321
Score = 23.0 bits (47), Expect(2) = 9.1
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 888 PPPXPPPXP 914
PPP PPP P
Sbjct: 316 PPPPPPPLP 324
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,137,977
Number of Sequences: 27780
Number of extensions: 167800
Number of successful extensions: 2770
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2070
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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