Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_F13
         (824 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50199-3|AAA91263.1|  555|Caenorhabditis elegans Hypothetical pr...    53   3e-07
AM748820-1|CAO72174.1|  555|Caenorhabditis elegans hexosaminidas...    53   3e-07

>U50199-3|AAA91263.1|  555|Caenorhabditis elegans Hypothetical
           protein T14F9.3 protein.
          Length = 555

 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 22/68 (32%), Positives = 34/68 (50%)
 Frame = +2

Query: 614 EVHDFPRYPHRGLLXDTSRHYISMSXXXXXXXXXXXXXXXXFHWHIVDXXXXPYXXXXXX 793
           E+ D PR+P RG++ D+SRH++S++                 HWH+VD    PY      
Sbjct: 163 EIFDKPRFPVRGIMIDSSRHFLSVNVIKRQLEIMSMNKLNVLHWHLVDSESFPYTSVKFP 222

Query: 794 DLXPLGXY 817
           +L  +G Y
Sbjct: 223 ELHGVGAY 230



 Score = 33.5 bits (73), Expect = 0.19
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +3

Query: 459 PHFGMIESYNLTIA-ADSTLRSSSIWGILRGLESWTHLFHLSXNRDQLHINKVKFTTFP 632
           P  G  E Y L ++  ++ + + ++WG LR +ES +HL        +  I  V+    P
Sbjct: 110 PVHGASEEYLLRVSLTEAVINAQTVWGALRAMESLSHLVFYDHKSQEYQIRTVEIFDKP 168


>AM748820-1|CAO72174.1|  555|Caenorhabditis elegans hexosaminidase
           protein.
          Length = 555

 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 22/68 (32%), Positives = 34/68 (50%)
 Frame = +2

Query: 614 EVHDFPRYPHRGLLXDTSRHYISMSXXXXXXXXXXXXXXXXFHWHIVDXXXXPYXXXXXX 793
           E+ D PR+P RG++ D+SRH++S++                 HWH+VD    PY      
Sbjct: 163 EIFDKPRFPVRGIMIDSSRHFLSVNVIKRQLEIMSMNKLNVLHWHLVDSESFPYTSVKFP 222

Query: 794 DLXPLGXY 817
           +L  +G Y
Sbjct: 223 ELHGVGAY 230



 Score = 33.5 bits (73), Expect = 0.19
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +3

Query: 459 PHFGMIESYNLTIA-ADSTLRSSSIWGILRGLESWTHLFHLSXNRDQLHINKVKFTTFP 632
           P  G  E Y L ++  ++ + + ++WG LR +ES +HL        +  I  V+    P
Sbjct: 110 PVHGASEEYLLRVSLTEAVINAQTVWGALRAMESLSHLVFYDHKSQEYQIRTVEIFDKP 168


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,850,487
Number of Sequences: 27780
Number of extensions: 310419
Number of successful extensions: 789
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)