Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_F10
         (872 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125952-4|AAD14698.1|  330|Caenorhabditis elegans Hypothetical ...    91   1e-18
AC006722-10|ABP57811.1|  330|Caenorhabditis elegans Hypothetical...    91   1e-18

>AF125952-4|AAD14698.1|  330|Caenorhabditis elegans Hypothetical
           protein C01B4.6 protein.
          Length = 330

 Score = 90.6 bits (215), Expect = 1e-18
 Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 1/136 (0%)
 Frame = +2

Query: 224 GFSVSVISYGATIQSIQVPDKYGITSDVVLGFDELDGYVNRNTPYLGTTVGRCANRIGGA 403
           G + +++ +GAT+  +  PDK G   D+VLGFD +D +  ++   +G TVGR ANRI  +
Sbjct: 13  GLTATLLPFGATLAKLTFPDKNGKNQDLVLGFDTIDEF-EKDAASIGKTVGRVANRIKNS 71

Query: 404 KFSIDGTTYQLANNIGKDHLHGGIXGFNKANWNSTVDG-TXVIFSYLSKDGEXGYPGDLI 580
               DG  Y +  N G  +LHGG  G     W         V FS  + + + G PGD  
Sbjct: 72  TLHFDGKQYTMTPNNGPHYLHGGPNGLGYRKWEVVRHAPESVSFSVRANEQDDGLPGDAK 131

Query: 581 TNITYEVTEDXALXVD 628
            ++TY V +   L ++
Sbjct: 132 IDVTYTVNDRNQLIIE 147


>AC006722-10|ABP57811.1|  330|Caenorhabditis elegans Hypothetical
           protein Y19D10A.16 protein.
          Length = 330

 Score = 90.6 bits (215), Expect = 1e-18
 Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 1/136 (0%)
 Frame = +2

Query: 224 GFSVSVISYGATIQSIQVPDKYGITSDVVLGFDELDGYVNRNTPYLGTTVGRCANRIGGA 403
           G + +++ +GAT+  +  PDK G   D+VLGFD +D +  ++   +G TVGR ANRI  +
Sbjct: 13  GLTATLLPFGATLAKLTFPDKNGKNQDLVLGFDTIDEF-EKDAASIGKTVGRVANRIKNS 71

Query: 404 KFSIDGTTYQLANNIGKDHLHGGIXGFNKANWNSTVDG-TXVIFSYLSKDGEXGYPGDLI 580
               DG  Y +  N G  +LHGG  G     W         V FS  + + + G PGD  
Sbjct: 72  TLHFDGKQYTMTPNNGPHYLHGGPNGLGYRKWEVVRHAPESVSFSVRANEQDDGLPGDAK 131

Query: 581 TNITYEVTEDXALXVD 628
            ++TY V +   L ++
Sbjct: 132 IDVTYTVNDRNQLIIE 147


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,071,484
Number of Sequences: 27780
Number of extensions: 325467
Number of successful extensions: 758
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)