Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_F05
(1047 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 41 3e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 40 8e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.029
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.038
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.15
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 1.1
SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyce... 28 1.9
SPCC4G3.03 |||WD repeat protein|Schizosaccharomyces pombe|chr 3|... 27 5.8
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 7.7
SPAC31A2.16 |gef2||RhoGEF Gef2|Schizosaccharomyces pombe|chr 1||... 26 7.7
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 40.7 bits (91), Expect = 3e-04
Identities = 26/68 (38%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Frame = +2
Query: 686 PIXXPPHPSXXXPTXSPIXSLPAPXPXSPXPPLSPXPXXPXS-XXSPPPXXSLPS--PXX 856
P PP PS P SP + P P P P P P P + SPP SLPS P
Sbjct: 140 PTSAPPRPSIPPP--SPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPM 197
Query: 857 XPXXXSPP 880
P PP
Sbjct: 198 PPKVPPPP 205
Score = 29.1 bits (62), Expect = 1.1
Identities = 18/59 (30%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Frame = +2
Query: 677 GXTPIXXPPHPSXXXPTXSPIXSLPAPXPXSPX-PPLSPXPXXPXSXXSPPPXXSLPSP 850
G + P + PT P P P PP SP P +PP SLP P
Sbjct: 116 GKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 28.7 bits (61), Expect = 1.4
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 6/72 (8%)
Frame = +2
Query: 683 TPIXXPPHPSXXXPTXS--PIXSLP-APXPXSPXPPLSPXPXXPXSXXSPPPXXS---LP 844
+P PP PS P S P + P AP P P P P PPP S +
Sbjct: 153 SPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVA 212
Query: 845 SPXXXPXXXSPP 880
+ P +PP
Sbjct: 213 NTSSRPSSFAPP 224
Score = 27.5 bits (58), Expect = 3.3
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +2
Query: 743 SLPAPXPXSPXPPLSPXPXXPXSXXSPPPXXSLPSPXXXPXXXS--PP 880
S A P +P PP P + P P PSP P S PP
Sbjct: 119 SASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPP 166
Score = 27.5 bits (58), Expect = 3.3
Identities = 23/70 (32%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Frame = +2
Query: 686 PIXXPPHPSXXXPTXSPIX-SLPAPXPXSPXPPL-SPXPXXPXSXXSP-PPXXSLPSPXX 856
P P PT +P S+P P P + PP+ S P P S P P + SP
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSP-ASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPS 186
Query: 857 XPXXXS--PP 880
P S PP
Sbjct: 187 APSLPSAVPP 196
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 39.5 bits (88), Expect = 8e-04
Identities = 38/158 (24%), Positives = 48/158 (30%), Gaps = 7/158 (4%)
Frame = +2
Query: 428 PPXXXXPLXKXKXRXLPXXFAPLGXXTXHPPVSPHXXXFXPTPXXXPXTVXPXSPGLXXV 607
PP P + P P+ + PPV P P P P P
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPK--PSVAVPPVPAPSGA 1120
Query: 608 SXXXKHPXXXGXLPXPKQTXGXWGXTPIXXP-PHPSXXXPTXSP-IXSLPAPXPXSPXPP 781
K +P P + P P PS P P + + P P P S PP
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Query: 782 LSPX-----PXXPXSXXSPPPXXSLPSPXXXPXXXSPP 880
+ P P S P P S+ P P +PP
Sbjct: 1181 VPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 35.1 bits (77), Expect = 0.017
Identities = 40/137 (29%), Positives = 48/137 (35%), Gaps = 2/137 (1%)
Frame = +2
Query: 476 PXXFAPLGXXTXHPPVSPHXXXFXPTPXXXPXTVXPXSPGLXXVSXXXKHPXXXGXLPXP 655
P +P PPV P P P P P S P P P
Sbjct: 999 PVSTSPAAPLARVPPVPKLSSKAPPVPL--PSADAPPIP---VPSTAPPVPIPTSTPPVP 1053
Query: 656 KQTXGXWGXTPIXXPPHPSXXXPTXSPIXSLPAPXPXSPXPPLSPXPXXP-XSXXSPP-P 829
K + G P PP P+ P+ S I S+PAP P P S P P S +PP P
Sbjct: 1054 KSSSG----APSAPPPVPA---PS-SEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVP 1105
Query: 830 XXSLPSPXXXPXXXSPP 880
S+ P +PP
Sbjct: 1106 KPSVAVPPVPAPSGAPP 1122
Score = 31.5 bits (68), Expect = 0.20
Identities = 35/118 (29%), Positives = 44/118 (37%), Gaps = 6/118 (5%)
Frame = +2
Query: 515 PPV-SPHXXXFXPTPXXXPXTVXPXSPGLXXV----SXXXKHPXXXGXLPXPKQTXGXWG 679
PPV +P P P V S G+ V + P P PK + G
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGV-- 1207
Query: 680 XTPIXXPPHPSXXXPTXSPIXSL-PAPXPXSPXPPLSPXPXXPXSXXSPPPXXSLPSP 850
P+ P PS P +P L P P P + PP+ P P S P S+PSP
Sbjct: 1208 -PPV---PPPSTAPPVPTPSAGLPPVPVPTAKAPPV-PAPSSEAPSVS-TPRSSVPSP 1259
Score = 26.2 bits (55), Expect = 7.7
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Frame = +2
Query: 734 PIXSLPAPXPXSPXPPLSPXPXXP-XSXXSPP-PXXSLPSPXXXPXXXSPP 880
P L P SP PL+ P P S +PP P S +P +PP
Sbjct: 992 PSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPP 1042
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.3 bits (75), Expect = 0.029
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +2
Query: 698 PPHPSXXXPTXSPI-XSLPAPXPXSPXPPLSPXPXXPXSXXSPPPXXSLPS 847
PP P+ PT +P +P P P PP P P PPP P+
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 28.3 bits (60), Expect = 1.9
Identities = 18/57 (31%), Positives = 21/57 (36%)
Frame = +2
Query: 710 SXXXPTXSPIXSLPAPXPXSPXPPLSPXPXXPXSXXSPPPXXSLPSPXXXPXXXSPP 880
S P + I PAP P P PP +P P PPP + P PP
Sbjct: 731 SPPPPPPAVIVPTPAPAPI-PVPPPAPIMGGP---PPPPPPPGVAGAGPPPPPPPPP 783
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.9 bits (74), Expect = 0.038
Identities = 21/82 (25%), Positives = 26/82 (31%), Gaps = 1/82 (1%)
Frame = +2
Query: 638 GXLPXPKQTXGXWGXTPIXXPPHPSXXXPTXSPIXSLP-APXPXSPXPPLSPXPXXPXSX 814
G P P + P P P P P+ + P P PP P P
Sbjct: 373 GRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLP 432
Query: 815 XSPPPXXSLPSPXXXPXXXSPP 880
S PP + +P P S P
Sbjct: 433 PSAPPSLPMGAPAAPPLPPSAP 454
Score = 29.5 bits (63), Expect = 0.82
Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 5/70 (7%)
Frame = +2
Query: 683 TPIXXPPHPSXXXPTXSPIXSLPAPXPXSPX-PPLSPX-PXXPXSXXSPPPXXSL---PS 847
TP PP P +P SLP P +P PP +P P P + PP P
Sbjct: 419 TPPSLPPSAPPSLPPSAP-PSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Query: 848 PXXXPXXXSP 877
P P +P
Sbjct: 478 PAPAPAPAAP 487
Score = 29.1 bits (62), Expect = 1.1
Identities = 23/67 (34%), Positives = 24/67 (35%), Gaps = 8/67 (11%)
Frame = +2
Query: 698 PPHPSXXXPTXSPIX--SLPAPXPXSPXPPLS------PXPXXPXSXXSPPPXXSLPSPX 853
PP PS PI S + P P PP S P P S PPP S PS
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTG 373
Query: 854 XXPXXXS 874
P S
Sbjct: 374 RQPPPLS 380
Score = 29.1 bits (62), Expect = 1.1
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Frame = +2
Query: 698 PPHPSXXXPTXSPIXSLPAPXPXS-PXPPLSPXPXXPXSXXSPPPXXSLP-SPXXXPXXX 871
PP P+ S SLP P S P + P P + +PP +P +P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 872 SPP 880
+PP
Sbjct: 475 APP 477
Score = 28.3 bits (60), Expect = 1.9
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = +2
Query: 698 PPHPSXXXPTXSPIXSLPAPXPXSPXPPLSPXPXXPXSXXSPPPXXS 838
PP P P + S+P P PP P P + PPP S
Sbjct: 337 PPPPPP--PRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSS 381
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.9 bits (69), Expect = 0.15
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Frame = +2
Query: 686 PIXXPP-HPSXXXPTXSPIXSLPAPXPXSPXPPLS-PXPXXPXSXXSPP-PXXSLPS 847
P+ PP P P + P P P PP + P P P S PP P S PS
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPS 1742
Score = 31.5 bits (68), Expect = 0.20
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = +2
Query: 743 SLPAPXPXSPXPPLSPXPXXPXSXXS-PPPXXSLPSPXXXPXXXSPP 880
S P P S PP P P S PPP + P P P PP
Sbjct: 1688 STPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.9 bits (59), Expect = 2.5
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 3/54 (5%)
Frame = +2
Query: 698 PPHPSXXXPTXSPIXSLPA-PXPXSPXPPLS--PXPXXPXSXXSPPPXXSLPSP 850
P HP P + P P P PP+S P P P PP P P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.5 bits (58), Expect = 3.3
Identities = 13/42 (30%), Positives = 16/42 (38%)
Frame = +2
Query: 755 PXPXSPXPPLSPXPXXPXSXXSPPPXXSLPSPXXXPXXXSPP 880
P P P S P + PPP S+P P P + P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGP 1727
Score = 27.1 bits (57), Expect = 4.4
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 698 PPHPSXXXPTXSPIXSLPAPX--PXSPXPPLSPXPXXPXSXXSPPPXXSLPSP 850
PP S P P+ P P P PP +P P P S S P S+P+P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPAS--SAP---SVPNP 1746
Score = 26.2 bits (55), Expect = 7.7
Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 3/51 (5%)
Frame = +2
Query: 701 PHPSXXXPTXSPIXSLPAPXPXSPXPPLSP-XPXXPXSXXSP--PPXXSLP 844
P PS +P+ LP P P P + P P S +P P +LP
Sbjct: 1470 PAPSSAPAPPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTLP 1520
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.1 bits (62), Expect = 1.1
Identities = 25/82 (30%), Positives = 29/82 (35%), Gaps = 1/82 (1%)
Frame = -1
Query: 885 RXGGEXXWGXXXGEGXEXXGGGEXXXXGXXGXGERGGXGEXGXGAGREXMGDXVGXXXEG 706
R G G G G GGG G G RGG G G G R G G
Sbjct: 11 RGGSRGGRGGFNG-GRGGFGGGRGGARGGGRGGARGGRG--GRGGARGGRGGSSGGRGGA 67
Query: 705 CGGXXMGVXP-QXPXVCLGXGK 643
GG + + P + V + GK
Sbjct: 68 KGGAKVIIEPHRHAGVFIARGK 89
>SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 28.3 bits (60), Expect = 1.9
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 683 TPIXXPPHPSXXXPTXSPIXSLPAPXPXSPXPPLSP 790
TP P P+ + P S+PA SP PP +P
Sbjct: 428 TPQVSPKRPTYSRSSPLPSASVPALGDGSPDPPAAP 463
>SPCC4G3.03 |||WD repeat protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 347
Score = 26.6 bits (56), Expect = 5.8
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 179 WKFFKEIERAVXTTRDVXIRPXXXVGXCYGXLAXGG 286
WK + E+ V + + +P +G C G +A GG
Sbjct: 58 WKIYPNSEKVVQVGQGLSFKPLSLLGKC-GYIAAGG 92
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 7.7
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = +2
Query: 722 PTXSPIXSLPAPXPXSPXPPLSPXPXXPXSXXSPPPXXSLPSPXXXPXXXSPP 880
PT +P + P P P P PP P P + P P ++ + PP
Sbjct: 225 PTYTPKQADPLPAPPPPPPPTLP-PQSTNTSQLPMPSRNVNNLGSQVNIPPPP 276
>SPAC31A2.16 |gef2||RhoGEF Gef2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1101
Score = 26.2 bits (55), Expect = 7.7
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -1
Query: 102 IFLVKRVSSTESMNNKYQILKEFR*XVKSVR 10
IFL+ + +S+ S N+Y ILK FR ++VR
Sbjct: 543 IFLISKYASSPSFFNEYPILK-FRCDFENVR 572
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,058,866
Number of Sequences: 5004
Number of extensions: 26236
Number of successful extensions: 181
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 129
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 549226150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -