Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_E18
(920 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0417 - 25052305-25052398,25052583-25052672,25052740-250529... 134 1e-31
07_03_0920 - 22603868-22603964,22604110-22604222,22604281-226044... 133 2e-31
04_04_1134 + 31137326-31137337,31137964-31138004,31138089-311381... 133 2e-31
08_01_0706 - 6235817-6235988,6236028-6236338,6236421-6236627,623... 132 4e-31
07_03_0919 - 22594980-22595111,22595398-22595427,22595522-225955... 124 1e-28
04_04_1135 + 31140032-31140043,31140552-31140592,31140680-311407... 124 1e-28
08_02_0383 - 16539472-16539633,16543044-16543205 33 0.42
04_04_1701 + 35470535-35471170,35471254-35471403,35471745-354720... 29 3.9
03_05_0248 + 22348504-22348568,22349064-22349371,22349476-223500... 29 6.9
>04_04_0417 -
25052305-25052398,25052583-25052672,25052740-25052905,
25053547-25053647,25053735-25053775,25054170-25054181
Length = 167
Score = 134 bits (323), Expect = 1e-31
Identities = 69/121 (57%), Positives = 81/121 (66%), Gaps = 12/121 (9%)
Frame = +2
Query: 71 MADQPEKAFQXQATVFLNRKGGMKRKDM-----RHHKNVGLGFKTPREAIEGTYIDKKCP 235
MA+Q E+AF Q VFL K K K R KN+GLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTERAFLKQPKVFLCPKKTTKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP 60
Query: 236 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNR-------FEKRHRNMSVHLS 394
FTG VSIRGRI+ G KM RTI++RR+YLH++ KY R +EKRH N+ H+S
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNLVAGYEKRHSNIPAHIS 120
Query: 395 P 397
P
Sbjct: 121 P 121
Score = 45.6 bits (103), Expect = 6e-05
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +3
Query: 411 VEIGDIVTIGECRPLSKTVRFNVLKV 488
V+ GD V IG+CRPLSKTVRFNVLKV
Sbjct: 125 VKEGDHVIIGQCRPLSKTVRFNVLKV 150
>07_03_0920 -
22603868-22603964,22604110-22604222,22604281-22604429,
22604732-22604832,22604917-22604957,22605584-22605595
Length = 170
Score = 133 bits (322), Expect = 2e-31
Identities = 69/123 (56%), Positives = 84/123 (68%), Gaps = 14/123 (11%)
Frame = +2
Query: 71 MADQPEKAFQXQATVFLN-RKGGMKRKD----MRHHKNVGLGFKTPREAIEGTYIDKKCP 235
MA+Q EKAF Q VFL+ +K G +K R K++GLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 236 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN---------RFEKRHRNMSVH 388
FTG VSIRGRI+ G KM RTI++RR+YLH++ KY R+EKRH N+ H
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQGANLPPCRYEKRHSNIPAH 120
Query: 389 LSP 397
+SP
Sbjct: 121 VSP 123
Score = 45.6 bits (103), Expect = 6e-05
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +3
Query: 411 VEIGDIVTIGECRPLSKTVRFNVLKV 488
V+ GD V IG+CRPLSKTVRFNVLKV
Sbjct: 127 VKEGDHVIIGQCRPLSKTVRFNVLKV 152
>04_04_1134 +
31137326-31137337,31137964-31138004,31138089-31138189,
31138489-31138637,31138696-31138808,31138954-31139050
Length = 170
Score = 133 bits (322), Expect = 2e-31
Identities = 69/123 (56%), Positives = 84/123 (68%), Gaps = 14/123 (11%)
Frame = +2
Query: 71 MADQPEKAFQXQATVFLN-RKGGMKRKD----MRHHKNVGLGFKTPREAIEGTYIDKKCP 235
MA+Q EKAF Q VFL+ +K G +K R K++GLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 236 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN---------RFEKRHRNMSVH 388
FTG VSIRGRI+ G KM RTI++RR+YLH++ KY R+EKRH N+ H
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQGANLPPCRYEKRHSNIPAH 120
Query: 389 LSP 397
+SP
Sbjct: 121 VSP 123
Score = 45.6 bits (103), Expect = 6e-05
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +3
Query: 411 VEIGDIVTIGECRPLSKTVRFNVLKV 488
V+ GD V IG+CRPLSKTVRFNVLKV
Sbjct: 127 VKEGDHVIIGQCRPLSKTVRFNVLKV 152
>08_01_0706 -
6235817-6235988,6236028-6236338,6236421-6236627,
6236718-6236889,6236994-6237249,6238015-6238073,
6238693-6238782,6238869-6239013,6239598-6239712,
6240690-6240701
Length = 512
Score = 132 bits (319), Expect = 4e-31
Identities = 56/81 (69%), Positives = 66/81 (81%)
Frame = +2
Query: 155 RHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLH 334
R KN+GLGFKTPREAIEGTYIDKKCPFTG VSIRGRI+ G KM RTI++RR+YLH
Sbjct: 25 RFWKNIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLH 84
Query: 335 YLPKYNRFEKRHRNMSVHLSP 397
++ KY R+EKRH N+ H+SP
Sbjct: 85 FVKKYQRYEKRHSNIPAHISP 105
Score = 44.8 bits (101), Expect = 1e-04
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +3
Query: 411 VEIGDIVTIGECRPLSKTVRFNVLKV 488
V+ GD V IG+CRPLSKTVRFNV+KV
Sbjct: 109 VKEGDHVIIGQCRPLSKTVRFNVIKV 134
>07_03_0919 -
22594980-22595111,22595398-22595427,22595522-22595587,
22596021-22596107,22596868-22596921,22597696-22597762,
22598099-22598215,22598536-22598637,22598784-22598902,
22598966-22599049,22599220-22599354,22599470-22599505,
22599581-22599700,22600557-22600645,22601507-22601596,
22601629-22601802,22602135-22602235,22602323-22602363,
22602872-22602883
Length = 551
Score = 124 bits (298), Expect = 1e-28
Identities = 61/100 (61%), Positives = 73/100 (73%), Gaps = 5/100 (5%)
Frame = +2
Query: 71 MADQPEKAFQXQATVFLN-RKGGMKRKD----MRHHKNVGLGFKTPREAIEGTYIDKKCP 235
MA+Q EKAF Q VFL+ +K G +K R K++GLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 236 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNR 355
FTG VSIRGRI+ G KM RTI++RR+YLH++ KY R
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQR 100
>04_04_1135 +
31140032-31140043,31140552-31140592,31140680-31140780,
31141113-31141419,31141565-31141661
Length = 185
Score = 124 bits (298), Expect = 1e-28
Identities = 61/100 (61%), Positives = 73/100 (73%), Gaps = 5/100 (5%)
Frame = +2
Query: 71 MADQPEKAFQXQATVFLN-RKGGMKRKD----MRHHKNVGLGFKTPREAIEGTYIDKKCP 235
MA+Q EKAF Q VFL+ +K G +K R K++GLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 236 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNR 355
FTG VSIRGRI+ G KM RTI++RR+YLH++ KY R
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQR 100
Score = 45.6 bits (103), Expect = 6e-05
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +3
Query: 411 VEIGDIVTIGECRPLSKTVRFNVLKV 488
V+ GD V IG+CRPLSKTVRFNVLKV
Sbjct: 142 VKEGDHVIIGQCRPLSKTVRFNVLKV 167
>08_02_0383 - 16539472-16539633,16543044-16543205
Length = 107
Score = 32.7 bits (71), Expect = 0.42
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 269 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVH 388
+ G+V KMQ+++V+ D L + YNR+ KR H
Sbjct: 4 VVGIVVSNKMQKSVVVAVDRLFHHKMYNRYVKRTSKFMAH 43
>04_04_1701 +
35470535-35471170,35471254-35471403,35471745-35472015,
35472152-35472262,35472476-35472650,35472748-35473020,
35473251-35473494,35473623-35473708,35473752-35473968
Length = 720
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 119 GKRWPVXETLSLADPPFCLTNEKQSXXGMP 30
G +WPV L L PP+ L N + G P
Sbjct: 467 GSQWPVEWPLRLEKPPYWLKNSEAGVYGKP 496
>03_05_0248 +
22348504-22348568,22349064-22349371,22349476-22350039,
22350082-22350128,22351244-22351715,22352349-22352611
Length = 572
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 203 IEGTYIDKKCPFTGNVSIRGRILTGVVQKM-KMQRTIVIRRDYLHYLPKY 349
+ GT PFTG++S G + + KM + +V +DYLH K+
Sbjct: 461 VRGTEDAPITPFTGDMSQSGDAIVAALMKMLAINPHLVTDKDYLHTAMKH 510
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,027,335
Number of Sequences: 37544
Number of extensions: 284682
Number of successful extensions: 596
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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