Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_E17
(884 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC130275-1|AAI30276.1| 796|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 44 6e-04
BC126287-1|AAI26288.1| 796|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 44 6e-04
BC016060-1|AAH16060.2| 767|Homo sapiens DDX27 protein protein. 44 6e-04
BC011927-1|AAH11927.2| 767|Homo sapiens DDX27 protein protein. 44 6e-04
BC009304-1|AAH09304.2| 769|Homo sapiens DDX27 protein protein. 44 6e-04
AY044431-1|AAK95821.1| 796|Homo sapiens RNA helicase-like prote... 44 6e-04
AL357560-1|CAH70236.1| 796|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 44 6e-04
AL049766-1|CAI22427.1| 796|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 44 6e-04
AK022979-1|BAB14343.1| 765|Homo sapiens protein ( Homo sapiens ... 44 6e-04
BC104480-1|AAI04481.1| 136|Homo sapiens DDX27 protein protein. 33 1.4
>BC130275-1|AAI30276.1| 796|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 27 protein.
Length = 796
Score = 44.4 bits (100), Expect = 6e-04
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +2
Query: 638 FFEXPXPYDEXASFYXMNLSXPXMKAIXSLXFVHPTP 748
FFE YDE SF MNLS P +KAI ++ F PTP
Sbjct: 207 FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTP 243
Score = 37.1 bits (82), Expect = 0.085
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +2
Query: 287 KKADFNPKFEFISSFEEYNKNTW---DDLHKYVRRNVKRTLDEKIEKRRAHVKVHG-NAD 454
+ ADFNP F F Y+ +W D + + ++ TLDEKIEK R K A
Sbjct: 78 RSADFNPDFVFTEKEGTYD-GSWALADVMSQLKKKRAATTLDEKIEKVRKKRKTEDKEAK 136
Query: 455 SVETDSDVEDKDG 493
S + + + E K+G
Sbjct: 137 SGKLEKEKEAKEG 149
>BC126287-1|AAI26288.1| 796|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 27 protein.
Length = 796
Score = 44.4 bits (100), Expect = 6e-04
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +2
Query: 638 FFEXPXPYDEXASFYXMNLSXPXMKAIXSLXFVHPTP 748
FFE YDE SF MNLS P +KAI ++ F PTP
Sbjct: 207 FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTP 243
Score = 37.1 bits (82), Expect = 0.085
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +2
Query: 287 KKADFNPKFEFISSFEEYNKNTW---DDLHKYVRRNVKRTLDEKIEKRRAHVKVHG-NAD 454
+ ADFNP F F Y+ +W D + + ++ TLDEKIEK R K A
Sbjct: 78 RSADFNPDFVFTEKEGTYD-GSWALADVMSQLKKKRAATTLDEKIEKVRKKRKTEDKEAK 136
Query: 455 SVETDSDVEDKDG 493
S + + + E K+G
Sbjct: 137 SGKLEKEKEAKEG 149
>BC016060-1|AAH16060.2| 767|Homo sapiens DDX27 protein protein.
Length = 767
Score = 44.4 bits (100), Expect = 6e-04
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +2
Query: 638 FFEXPXPYDEXASFYXMNLSXPXMKAIXSLXFVHPTP 748
FFE YDE SF MNLS P +KAI ++ F PTP
Sbjct: 178 FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTP 214
Score = 37.1 bits (82), Expect = 0.085
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +2
Query: 287 KKADFNPKFEFISSFEEYNKNTW---DDLHKYVRRNVKRTLDEKIEKRRAHVKVHG-NAD 454
+ ADFNP F F Y+ +W D + + ++ TLDEKIEK R K A
Sbjct: 49 RSADFNPDFVFTEKEGTYD-GSWALADVMSQLKKKRAATTLDEKIEKVRKKRKTEDKEAK 107
Query: 455 SVETDSDVEDKDG 493
S + + + E K+G
Sbjct: 108 SGKLEKEKEAKEG 120
>BC011927-1|AAH11927.2| 767|Homo sapiens DDX27 protein protein.
Length = 767
Score = 44.4 bits (100), Expect = 6e-04
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +2
Query: 638 FFEXPXPYDEXASFYXMNLSXPXMKAIXSLXFVHPTP 748
FFE YDE SF MNLS P +KAI ++ F PTP
Sbjct: 178 FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTP 214
Score = 37.1 bits (82), Expect = 0.085
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +2
Query: 287 KKADFNPKFEFISSFEEYNKNTW---DDLHKYVRRNVKRTLDEKIEKRRAHVKVHG-NAD 454
+ ADFNP F F Y+ +W D + + ++ TLDEKIEK R K A
Sbjct: 49 RSADFNPDFVFTEKEGTYD-GSWALADVMSQLKKKRAATTLDEKIEKVRKKRKTEDKEAK 107
Query: 455 SVETDSDVEDKDG 493
S + + + E K+G
Sbjct: 108 SGKLEKEKEAKEG 120
>BC009304-1|AAH09304.2| 769|Homo sapiens DDX27 protein protein.
Length = 769
Score = 44.4 bits (100), Expect = 6e-04
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +2
Query: 638 FFEXPXPYDEXASFYXMNLSXPXMKAIXSLXFVHPTP 748
FFE YDE SF MNLS P +KAI ++ F PTP
Sbjct: 180 FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTP 216
Score = 37.1 bits (82), Expect = 0.085
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +2
Query: 287 KKADFNPKFEFISSFEEYNKNTW---DDLHKYVRRNVKRTLDEKIEKRRAHVKVHG-NAD 454
+ ADFNP F F Y+ +W D + + ++ TLDEKIEK R K A
Sbjct: 51 RSADFNPDFVFTEKEGTYD-GSWALADVMSQLKKKRAATTLDEKIEKVRKKRKTEDKEAK 109
Query: 455 SVETDSDVEDKDG 493
S + + + E K+G
Sbjct: 110 SGKLEKEKEAKEG 122
>AY044431-1|AAK95821.1| 796|Homo sapiens RNA helicase-like protein
protein.
Length = 796
Score = 44.4 bits (100), Expect = 6e-04
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +2
Query: 638 FFEXPXPYDEXASFYXMNLSXPXMKAIXSLXFVHPTP 748
FFE YDE SF MNLS P +KAI ++ F PTP
Sbjct: 207 FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTP 243
Score = 37.1 bits (82), Expect = 0.085
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +2
Query: 287 KKADFNPKFEFISSFEEYNKNTW---DDLHKYVRRNVKRTLDEKIEKRRAHVKVHG-NAD 454
+ ADFNP F F Y+ +W D + + ++ TLDEKIEK R K A
Sbjct: 78 RSADFNPDFVFTEKEGTYD-GSWALADVMSQLKKKRAATTLDEKIEKVRKKRKTEDKEAK 136
Query: 455 SVETDSDVEDKDG 493
S + + + E K+G
Sbjct: 137 SGKLEKEKEAKEG 149
>AL357560-1|CAH70236.1| 796|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 27 protein.
Length = 796
Score = 44.4 bits (100), Expect = 6e-04
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +2
Query: 638 FFEXPXPYDEXASFYXMNLSXPXMKAIXSLXFVHPTP 748
FFE YDE SF MNLS P +KAI ++ F PTP
Sbjct: 207 FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTP 243
Score = 37.1 bits (82), Expect = 0.085
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +2
Query: 287 KKADFNPKFEFISSFEEYNKNTW---DDLHKYVRRNVKRTLDEKIEKRRAHVKVHG-NAD 454
+ ADFNP F F Y+ +W D + + ++ TLDEKIEK R K A
Sbjct: 78 RSADFNPDFVFTEKEGTYD-GSWALADVMSQLKKKRAATTLDEKIEKVRKKRKTEDKEAK 136
Query: 455 SVETDSDVEDKDG 493
S + + + E K+G
Sbjct: 137 SGKLEKEKEAKEG 149
>AL049766-1|CAI22427.1| 796|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 27 protein.
Length = 796
Score = 44.4 bits (100), Expect = 6e-04
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +2
Query: 638 FFEXPXPYDEXASFYXMNLSXPXMKAIXSLXFVHPTP 748
FFE YDE SF MNLS P +KAI ++ F PTP
Sbjct: 207 FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTP 243
Score = 37.1 bits (82), Expect = 0.085
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +2
Query: 287 KKADFNPKFEFISSFEEYNKNTW---DDLHKYVRRNVKRTLDEKIEKRRAHVKVHG-NAD 454
+ ADFNP F F Y+ +W D + + ++ TLDEKIEK R K A
Sbjct: 78 RSADFNPDFVFTEKEGTYD-GSWALADVMSQLKKKRAATTLDEKIEKVRKKRKTEDKEAK 136
Query: 455 SVETDSDVEDKDG 493
S + + + E K+G
Sbjct: 137 SGKLEKEKEAKEG 149
>AK022979-1|BAB14343.1| 765|Homo sapiens protein ( Homo sapiens
cDNA FLJ12917 fis, clone NT2RP2004568, weakly similar to
PUTATIVE ATP-DEPENDENT RNA HELICASE C30D11.03. ).
Length = 765
Score = 44.4 bits (100), Expect = 6e-04
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +2
Query: 638 FFEXPXPYDEXASFYXMNLSXPXMKAIXSLXFVHPTP 748
FFE YDE SF MNLS P +KAI ++ F PTP
Sbjct: 176 FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTP 212
Score = 37.1 bits (82), Expect = 0.085
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +2
Query: 287 KKADFNPKFEFISSFEEYNKNTW---DDLHKYVRRNVKRTLDEKIEKRRAHVKVHG-NAD 454
+ ADFNP F F Y+ +W D + + ++ TLDEKIEK R K A
Sbjct: 47 RSADFNPDFVFTEKEGTYD-GSWALADVMSQLKKKRAATTLDEKIEKVRKKRKTEDKEAK 105
Query: 455 SVETDSDVEDKDG 493
S + + + E K+G
Sbjct: 106 SGKLEKEKEAKEG 118
>BC104480-1|AAI04481.1| 136|Homo sapiens DDX27 protein protein.
Length = 136
Score = 33.1 bits (72), Expect = 1.4
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +2
Query: 287 KKADFNPKFEFISSFEEYNKNTW---DDLHKYVRRNVKRTLDEKIEKRR 424
+ ADFNP F F Y+ +W D + + ++ TLDEKIEK R
Sbjct: 78 RSADFNPDFVFTEKEGTYD-GSWALADVMSQLKKKRAATTLDEKIEKVR 125
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,052,978
Number of Sequences: 237096
Number of extensions: 1455952
Number of successful extensions: 3104
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3091
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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