Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_E17
         (884 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    26   0.53 
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   4.9  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   4.9  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    23   4.9  

>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 428 ALYVSQSSHPMSFLHYDVRTCV 363
           A+Y S  S  + F  YDV+TCV
Sbjct: 147 AVYKSSCSIDVEFFPYDVQTCV 168


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +3

Query: 102 LQLDICEVCGK*FAQIELNNNEICRRAPXI*SKQFTMEKKWRISLKNL 245
           LQL  CEV    +  ++L  N I      I  K+F  E    +S++ L
Sbjct: 310 LQLPGCEVLCPLYKYLQLIENVIPSNEELICDKRFVDESANNLSIEEL 357


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +3

Query: 102 LQLDICEVCGK*FAQIELNNNEICRRAPXI*SKQFTMEKKWRISLKNL 245
           LQL  CEV    +  ++L  N I      I  K+F  E    +S++ L
Sbjct: 325 LQLPGCEVLCPLYKYLQLIENVIPSNEELICDKRFVDESANNLSIEEL 372


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/20 (40%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = +2

Query: 365 HKYVRRNVKRTLDEK-IEKR 421
           HK++ + +K+T++ K I KR
Sbjct: 114 HKFISKKIKKTMENKDITKR 133


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,899
Number of Sequences: 438
Number of extensions: 3269
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)