Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_E16
(880 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0655 + 30668706-30668849,30669043-30669471 33 0.40
03_06_0613 - 35090377-35090478,35090686-35090839,35090925-350910... 31 1.2
01_06_1171 - 35089719-35090336,35090596-35090715,35090851-350911... 31 1.6
01_01_0820 - 6395150-6395769,6395865-6396294 31 1.6
01_01_1130 + 8959909-8960396,8960588-8960638,8960736-8960827,896... 29 3.7
12_01_0874 + 8384332-8384657,8385447-8386044 29 4.9
10_08_0532 + 18580579-18580746,18581923-18581997,18582659-185838... 29 4.9
01_01_0984 + 7779251-7779329,7779354-7780054 29 4.9
08_02_0799 - 21317728-21317895,21318018-21318146,21318396-213184... 29 6.5
05_02_0081 + 6432957-6433289,6433367-6433882,6434283-6434570 29 6.5
04_03_0348 + 14735581-14737071 29 6.5
02_03_0167 - 15923872-15925683 29 6.5
02_04_0277 - 21494616-21494747,21494830-21494916,21495025-214951... 28 8.6
>02_05_0655 + 30668706-30668849,30669043-30669471
Length = 190
Score = 32.7 bits (71), Expect = 0.40
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2
Query: 279 PAYNSGMRLRILCRYPRRPALQNLGICQGGLRPCDCR 169
P SG+RL R+PRR +L C+GG PC R
Sbjct: 95 PLVRSGLRLLGSSRHPRRGSLNCPRHCRGGFSPCHRR 131
>03_06_0613 -
35090377-35090478,35090686-35090839,35090925-35091004,
35091191-35091340,35091920-35092045,35096500-35096916
Length = 342
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/82 (28%), Positives = 31/82 (37%)
Frame = -1
Query: 391 GTDSLEQPPRRALQVVSDVQLXKGTFNQPPGNAMHVMACVQFRHATPDFVQIPSTSSSPK 212
G+ S P A S + L PP A C + +SSS +
Sbjct: 38 GSSSASSSPAPAPAAASTLLLPPRLLAPPPAAAASHGGCDTGANILASTTTPSPSSSSHR 97
Query: 211 PGDMPRGTAAMRLPFTTPRRSK 146
R TA++ LPFT PRR +
Sbjct: 98 RSMSARFTASLVLPFTRPRRGR 119
>01_06_1171 -
35089719-35090336,35090596-35090715,35090851-35091108,
35091934-35092563
Length = 541
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/93 (23%), Positives = 38/93 (40%)
Frame = -1
Query: 367 PRRALQVVSDVQLXKGTFNQPPGNAMHVMACVQFRHATPDFVQIPSTSSSPKPGDMPRGT 188
P +A ++V+D+ L N+ P + A V+ + D +++P +P PR
Sbjct: 412 PTKAARIVADIILR--CLNKDPSERPTMRAVVESLASVQD-IKVPCRYPLQEPSAAPRKV 468
Query: 187 AAMRLPFTTPRRSKEVVTEQPTPKTRNNY*FKP 89
VVT P+P +RN + P
Sbjct: 469 MLKSTSLNGIIHHHPVVTFSPSPPSRNQHLLSP 501
>01_01_0820 - 6395150-6395769,6395865-6396294
Length = 349
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -1
Query: 310 QPPGNAMHVMACVQFRHATPD-FVQIPSTSSSPKPGDMPRGTAAMRLPFTTPRRSKEVVT 134
+PP + QF T D FV + + P P D PRG + LP R K VT
Sbjct: 76 RPPAGYNSALRVNQFADLTNDEFVSTHTGAKPPCPKDAPRGVDPIWLPCCIDWRYKGAVT 135
Query: 133 E 131
+
Sbjct: 136 D 136
>01_01_1130 +
8959909-8960396,8960588-8960638,8960736-8960827,
8960964-8961054,8961877-8961937,8962172-8962216,
8962318-8962391,8962565-8962637,8963288-8963345,
8963398-8963468,8963801-8963837,8964040-8964128,
8964207-8964263,8964366-8964449,8964529-8964627,
8964765-8964869,8965145-8965216,8965308-8965497,
8965810-8966207
Length = 744
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = -1
Query: 322 GTFNQPPGNAMHV-MACVQFRHATPDFVQIPSTSSSPKPGDMPRGTAAMRLPFTTP 158
GT PP +A A +P + +P P +PR T+A P TTP
Sbjct: 93 GTLTPPPSSAPSGGRATSSEARESPHATSVDDGGRAPPPPPLPRPTSARATPATTP 148
>12_01_0874 + 8384332-8384657,8385447-8386044
Length = 307
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = -3
Query: 551 CLGHNAALWSAXLPSGKPSGGEHRWNFLQS*AFREHADLFTAVVESLIRDVTLW 390
C G AA W A G P GG R ++L + D + E +DV +W
Sbjct: 256 CGGACAAAWEAAEMRGPPGGGGSRADWLWR---QRQGDAYKVFDEMATKDVEMW 306
>10_08_0532 +
18580579-18580746,18581923-18581997,18582659-18583887,
18584853-18585013,18585272-18585279,18587737-18588768
Length = 890
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +3
Query: 279 AITCIALPGGWLKVPLXSCTSDTTCNALLGGCSKESVPECDVTNQRFHHSCEQVGV 446
A TC L GG+ KV S +D T A L S E +P+ ++ EQ V
Sbjct: 774 ANTCYKLAGGYFKVGQVSKAADLTKKA-LASASNEWIPDLTNVLMSLNYFAEQKNV 828
>01_01_0984 + 7779251-7779329,7779354-7780054
Length = 259
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/72 (29%), Positives = 31/72 (43%)
Frame = -1
Query: 586 PNIVRFWGRIRNVXGTTQLCGLLXSRRANLQEASTGGTSCSRERSGNTPTCSQLWWNL*F 407
P VR W RI +V ++ + + +L + T RSG TP CS WW
Sbjct: 15 PGAVRQWIRIIDVNHFERIPAGMHEQILDLLRLTMSSTRRCSPRSGVTP-CSGGWWGTLC 73
Query: 406 VTSHSGTDSLEQ 371
+S + LE+
Sbjct: 74 KSSSAPDTQLEK 85
>08_02_0799 -
21317728-21317895,21318018-21318146,21318396-21318457,
21318519-21318534,21318590-21318694,21318993-21319133,
21319338-21319412,21319510-21319611,21319697-21319792,
21320340-21320451,21320642-21320715,21321016-21321097,
21321201-21321508
Length = 489
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 532 AALCPRHYGYDPRTAQCSVPLEHGPCNQRPVPKCLT-VGQTD 654
+ +C HY Y P T +VP P N R +CLT GQ D
Sbjct: 447 SCICNTHYVYLPITEVITVPKRVNP-NSRMWHRCLTSTGQPD 487
>05_02_0081 + 6432957-6433289,6433367-6433882,6434283-6434570
Length = 378
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +3
Query: 240 CTKSGVACLNCTQAITCI-ALPGGWLKVPLXSCTSDTTCNALLGGCSKESVPECDVTNQ 413
C C C + I L G L++PL S S ++ +A S P+CD+ +
Sbjct: 54 CADEAALCARCDRDIHAANRLAGKHLRLPLLSPASSSSSSAAALAPPPPSPPKCDICQE 112
>04_03_0348 + 14735581-14737071
Length = 496
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 153 LRGVVNGNRMAAVPLGISPGFGEL--DVEGICTKSGVACL 266
L GVV G R AA+P G+ P + D+ +C + CL
Sbjct: 62 LDGVVPGFRFAAIPDGLPPSDPDATQDIPALCYSTMTTCL 101
>02_03_0167 - 15923872-15925683
Length = 603
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 584 EHCAVLGSYP*CLGHNAALWSAXLPSGKPS 495
+H A GSY CL H A+L +A L G S
Sbjct: 24 QHAAASGSYSRCLRHYASLLAAGLGGGGAS 53
>02_04_0277 -
21494616-21494747,21494830-21494916,21495025-21495157,
21495267-21495540,21495829-21495955,21496048-21496311
Length = 338
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1
Query: 229 TSSSPKPGDMPRGTAAMRLPFTTPRRSKEVVTEQPTPKTRNNY 101
T P MP+G ++ + + TPR S++ V + PK N+Y
Sbjct: 247 TGRKPVDHTMPKGQQSL-VTWATPRLSEDKVKQCVDPKLNNDY 288
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,099,485
Number of Sequences: 37544
Number of extensions: 652449
Number of successful extensions: 1623
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1622
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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