Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_E16
         (880 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40414-2|AAA81405.2|  634|Caenorhabditis elegans Hypothetical pr...    31   0.82 
AC024817-35|AAP13745.1|  232|Caenorhabditis elegans Hypothetical...    30   1.9  
AC024817-34|AAK68529.2|  249|Caenorhabditis elegans Hypothetical...    30   1.9  
Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical p...    30   2.5  
Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical p...    30   2.5  
Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical pr...    30   2.5  
U40954-8|AAM69083.2|  471|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z82269-7|CAB05204.2|  786|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z82269-6|CAB05206.3|  809|Caenorhabditis elegans Hypothetical pr...    28   7.7  
D49525-2|BAA08471.1|  567|Caenorhabditis elegans TPA-1B protein.       28   7.7  
D49525-1|BAA08470.1|  704|Caenorhabditis elegans TPA-1A protein.       28   7.7  
D14815-1|BAA03556.1|  557|Caenorhabditis elegans TPA-1 protein.        28   7.7  
DQ143943-1|AAZ73241.1|  770|Caenorhabditis elegans RNA-decapping...    28   7.7  
AL021488-8|CAJ43919.1|  786|Caenorhabditis elegans Hypothetical ...    28   7.7  
AL021488-7|CAJ43918.1|  809|Caenorhabditis elegans Hypothetical ...    28   7.7  
AF078781-3|AAC26917.1|  567|Caenorhabditis elegans Tpa (tetradec...    28   7.7  
AF078781-2|AAC26916.1|  704|Caenorhabditis elegans Tpa (tetradec...    28   7.7  

>U40414-2|AAA81405.2|  634|Caenorhabditis elegans Hypothetical
           protein F53B3.2 protein.
          Length = 634

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 19/57 (33%), Positives = 24/57 (42%)
 Frame = -1

Query: 244 VQIPSTSSSPKPGDMPRGTAAMRLPFTTPRRSKEVVTEQPTPKTRNNY*FKPHFTNT 74
           V  P T+S P P  MP        P+TTP       T  P P+  + Y  +P F  T
Sbjct: 112 VDKPETTSKPTPRPMP---TVFTFPYTTPH----FTTSTPVPEVTSTYDPRPRFRYT 161


>AC024817-35|AAP13745.1|  232|Caenorhabditis elegans Hypothetical
           protein Y54G2A.5b protein.
          Length = 232

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = -1

Query: 265 RHATPDFVQIPSTSSSPKPGDMPRGTAAMRLPFTTPRRSKEVVTEQPTP 119
           R + P F+  P  +S+PKP  + R      LP  TPRR   +V +Q  P
Sbjct: 136 RKSIPGFMAAPKFASTPKPDGIRRSMVDGSLP--TPRRG-SLVKQQRAP 181


>AC024817-34|AAK68529.2|  249|Caenorhabditis elegans Hypothetical
           protein Y54G2A.5a protein.
          Length = 249

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = -1

Query: 265 RHATPDFVQIPSTSSSPKPGDMPRGTAAMRLPFTTPRRSKEVVTEQPTP 119
           R + P F+  P  +S+PKP  + R      LP  TPRR   +V +Q  P
Sbjct: 136 RKSIPGFMAAPKFASTPKPDGIRRSMVDGSLP--TPRRG-SLVKQQRAP 181


>Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical
            protein C53B4.4e protein.
          Length = 1544

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
 Frame = +1

Query: 439  SACSLNAHDCRKFHLCSPPEGLPDGRXADHRAALCPRHYGYDPRTAQCSVPL--EHGPCN 612
            S C    +  ++ +  SPP+  PD    D   A   RH GYDPR     + L   + P N
Sbjct: 1118 SNCHREVYQLKQPNTSSPPQTSPD----DPMLAEFARHAGYDPRLCFGDITLGFRYFP-N 1172

Query: 613  QRPVPKCLTVG 645
              PV K +  G
Sbjct: 1173 GFPVDKAINSG 1183


>Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical
            protein C53B4.4d protein.
          Length = 1301

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
 Frame = +1

Query: 439  SACSLNAHDCRKFHLCSPPEGLPDGRXADHRAALCPRHYGYDPRTAQCSVPL--EHGPCN 612
            S C    +  ++ +  SPP+  PD    D   A   RH GYDPR     + L   + P N
Sbjct: 838  SNCHREVYQLKQPNTSSPPQTSPD----DPMLAEFARHAGYDPRLCFGDITLGFRYFP-N 892

Query: 613  QRPVPKCLTVG 645
              PV K +  G
Sbjct: 893  GFPVDKAINSG 903


>Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical protein
            C53B4.4c protein.
          Length = 1304

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
 Frame = +1

Query: 439  SACSLNAHDCRKFHLCSPPEGLPDGRXADHRAALCPRHYGYDPRTAQCSVPL--EHGPCN 612
            S C    +  ++ +  SPP+  PD    D   A   RH GYDPR     + L   + P N
Sbjct: 838  SNCHREVYQLKQPNTSSPPQTSPD----DPMLAEFARHAGYDPRLCFGDITLGFRYFP-N 892

Query: 613  QRPVPKCLTVG 645
              PV K +  G
Sbjct: 893  GFPVDKAINSG 903


>Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical protein
            C53B4.4b protein.
          Length = 1586

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
 Frame = +1

Query: 439  SACSLNAHDCRKFHLCSPPEGLPDGRXADHRAALCPRHYGYDPRTAQCSVPL--EHGPCN 612
            S C    +  ++ +  SPP+  PD    D   A   RH GYDPR     + L   + P N
Sbjct: 1120 SNCHREVYQLKQPNTSSPPQTSPD----DPMLAEFARHAGYDPRLCFGDITLGFRYFP-N 1174

Query: 613  QRPVPKCLTVG 645
              PV K +  G
Sbjct: 1175 GFPVDKAINSG 1185


>Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical protein
            C53B4.4a protein.
          Length = 1584

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
 Frame = +1

Query: 439  SACSLNAHDCRKFHLCSPPEGLPDGRXADHRAALCPRHYGYDPRTAQCSVPL--EHGPCN 612
            S C    +  ++ +  SPP+  PD    D   A   RH GYDPR     + L   + P N
Sbjct: 1118 SNCHREVYQLKQPNTSSPPQTSPD----DPMLAEFARHAGYDPRLCFGDITLGFRYFP-N 1172

Query: 613  QRPVPKCLTVG 645
              PV K +  G
Sbjct: 1173 GFPVDKAINSG 1183


>U40954-8|AAM69083.2|  471|Caenorhabditis elegans Hypothetical
           protein ZK813.5 protein.
          Length = 471

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -1

Query: 235 PSTSSSPKPGDMPRGTAAMRLPFTTPRRSKEVVTEQPTPKTR 110
           PS S +PKP     G A   +P   PR+  +  T++   KT+
Sbjct: 420 PSPSETPKPRAQDAGKARSSVPSKIPRQIPQFKTKRNNSKTK 461


>Z82269-7|CAB05204.2|  786|Caenorhabditis elegans Hypothetical
           protein F52G2.1b protein.
          Length = 786

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -1

Query: 310 QPPGNAMHVMACVQFRHATPDFVQIPSTSSSPKPGDMPRGTAAMRLPFTTPRRSKEVVTE 131
           +PP +   ++A +Q      D  + PST S PK  +  R  A  + P + P    E   +
Sbjct: 33  EPPSSVQKLLASLQQAQNKSDLSEQPST-SKPKKNE-KRKKAVAQAPASAPAPGPEEKKK 90

Query: 130 QP 125
           QP
Sbjct: 91  QP 92


>Z82269-6|CAB05206.3|  809|Caenorhabditis elegans Hypothetical
           protein F52G2.1a protein.
          Length = 809

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -1

Query: 310 QPPGNAMHVMACVQFRHATPDFVQIPSTSSSPKPGDMPRGTAAMRLPFTTPRRSKEVVTE 131
           +PP +   ++A +Q      D  + PST S PK  +  R  A  + P + P    E   +
Sbjct: 56  EPPSSVQKLLASLQQAQNKSDLSEQPST-SKPKKNE-KRKKAVAQAPASAPAPGPEEKKK 113

Query: 130 QP 125
           QP
Sbjct: 114 QP 115


>D49525-2|BAA08471.1|  567|Caenorhabditis elegans TPA-1B protein.
          Length = 567

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 351 CNALLGGCSKESVPECDVTNQRFHHSCEQV 440
           C ++L G  K+ +  C+V N   HH CE++
Sbjct: 117 CGSMLYGLFKQGL-RCEVCNVACHHKCERL 145


>D49525-1|BAA08470.1|  704|Caenorhabditis elegans TPA-1A protein.
          Length = 704

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 351 CNALLGGCSKESVPECDVTNQRFHHSCEQV 440
           C ++L G  K+ +  C+V N   HH CE++
Sbjct: 254 CGSMLYGLFKQGL-RCEVCNVACHHKCERL 282


>D14815-1|BAA03556.1|  557|Caenorhabditis elegans TPA-1 protein.
          Length = 557

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 351 CNALLGGCSKESVPECDVTNQRFHHSCEQV 440
           C ++L G  K+ +  C+V N   HH CE++
Sbjct: 107 CGSMLYGLFKQGL-RCEVCNVACHHKCERL 135


>DQ143943-1|AAZ73241.1|  770|Caenorhabditis elegans RNA-decapping
           protein protein.
          Length = 770

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -1

Query: 310 QPPGNAMHVMACVQFRHATPDFVQIPSTSSSPKPGDMPRGTAAMRLPFTTPRRSKEVVTE 131
           +PP +   ++A +Q      D  + PST S PK  +  R  A  + P + P    E   +
Sbjct: 17  EPPSSVQKLLASLQQAQNKSDLSEQPST-SKPKKNE-KRKKAVAQAPASAPAPGPEEKKK 74

Query: 130 QP 125
           QP
Sbjct: 75  QP 76


>AL021488-8|CAJ43919.1|  786|Caenorhabditis elegans Hypothetical
           protein F52G2.1b protein.
          Length = 786

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -1

Query: 310 QPPGNAMHVMACVQFRHATPDFVQIPSTSSSPKPGDMPRGTAAMRLPFTTPRRSKEVVTE 131
           +PP +   ++A +Q      D  + PST S PK  +  R  A  + P + P    E   +
Sbjct: 33  EPPSSVQKLLASLQQAQNKSDLSEQPST-SKPKKNE-KRKKAVAQAPASAPAPGPEEKKK 90

Query: 130 QP 125
           QP
Sbjct: 91  QP 92


>AL021488-7|CAJ43918.1|  809|Caenorhabditis elegans Hypothetical
           protein F52G2.1a protein.
          Length = 809

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -1

Query: 310 QPPGNAMHVMACVQFRHATPDFVQIPSTSSSPKPGDMPRGTAAMRLPFTTPRRSKEVVTE 131
           +PP +   ++A +Q      D  + PST S PK  +  R  A  + P + P    E   +
Sbjct: 56  EPPSSVQKLLASLQQAQNKSDLSEQPST-SKPKKNE-KRKKAVAQAPASAPAPGPEEKKK 113

Query: 130 QP 125
           QP
Sbjct: 114 QP 115


>AF078781-3|AAC26917.1|  567|Caenorhabditis elegans Tpa
           (tetradecanoyl phorbol acetate)resistant protein 1,
           isoform b protein.
          Length = 567

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 351 CNALLGGCSKESVPECDVTNQRFHHSCEQV 440
           C ++L G  K+ +  C+V N   HH CE++
Sbjct: 117 CGSMLYGLFKQGL-RCEVCNVACHHKCERL 145


>AF078781-2|AAC26916.1|  704|Caenorhabditis elegans Tpa
           (tetradecanoyl phorbol acetate)resistant protein 1,
           isoform a protein.
          Length = 704

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 351 CNALLGGCSKESVPECDVTNQRFHHSCEQV 440
           C ++L G  K+ +  C+V N   HH CE++
Sbjct: 254 CGSMLYGLFKQGL-RCEVCNVACHHKCERL 282


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,783,594
Number of Sequences: 27780
Number of extensions: 505296
Number of successful extensions: 1388
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1386
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)