Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_E14
         (853 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110490-2|CAB54440.1|   91|Caenorhabditis elegans Hypothetical ...   126   2e-29
Z81039-4|CAB02776.1|  361|Caenorhabditis elegans Hypothetical pr...    31   1.4  
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr...    28   7.3  

>AL110490-2|CAB54440.1|   91|Caenorhabditis elegans Hypothetical
           protein Y48B6A.2 protein.
          Length = 91

 Score =  126 bits (305), Expect = 2e-29
 Identities = 52/85 (61%), Positives = 69/85 (81%)
 Frame = +2

Query: 89  KRLELLGKXGTRYGASLRKMVKKXEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKRTVA 268
           K++ ++GK GTRYGASLRKM KK EV QH++YTCSFCGK+AMKR   GIW+C +C + VA
Sbjct: 6   KKVGIVGKYGTRYGASLRKMAKKLEVAQHSRYTCSFCGKEAMKRKATGIWNCAKCHKVVA 65

Query: 269 GGAWVFSTTAASSCRSAVRRLREVK 343
           GGA+V+ T  A++ RS +RRLR++K
Sbjct: 66  GGAYVYGTVTAATVRSTIRRLRDLK 90


>Z81039-4|CAB02776.1|  361|Caenorhabditis elegans Hypothetical
           protein C25D7.5 protein.
          Length = 361

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 63  GLQNGQTYQKGWNYLANXAHVTVPLYVKWSK 155
           G QN Q+Y + WN+    +H    +Y++ SK
Sbjct: 26  GNQNKQSYPENWNFYPRQSHYDYSVYIRSSK 56


>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
           protein C16A3.7 protein.
          Length = 1119

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 170 QHAKYTCSFCGKDAMKRSCVGIWSCKRC 253
           ++ KY C+ C      R   G+WSCK C
Sbjct: 229 ENNKYECAICYTRITTRQ--GVWSCKTC 254


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,020,719
Number of Sequences: 27780
Number of extensions: 220131
Number of successful extensions: 533
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)