Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_E13
(842 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 196 3e-51
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 162 5e-41
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 152 7e-38
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 113 4e-26
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 102 7e-23
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 99 9e-22
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 95 1e-20
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 85 2e-17
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 84 2e-17
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 69 1e-12
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 62 1e-10
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 54 3e-08
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 53 6e-08
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 51 2e-07
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 51 2e-07
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 49 7e-07
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 44 3e-05
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 42 1e-04
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 196 bits (478), Expect = 3e-51
Identities = 94/161 (58%), Positives = 118/161 (73%)
Frame = +2
Query: 155 KXLLIGASGVGXXSXLFXFSEXAFNISFISTIGIDFKIRTIXLDGXKVKLXIWXTAGXEX 334
K LLIG SGVG L FSE +F SFI+TIGIDFKIRTI LDG ++KL IW TAG E
Sbjct: 11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 70
Query: 335 FRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNXEEXASADVEKMILGNKCDLXSQR 514
FRTITTAYYRG+MGI+L+YDVT++KSF+N++ W N E+ AS +V K+++GNKCD QR
Sbjct: 71 FRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQR 130
Query: 515 XVSKERGXXLAIEYXIKFVEXSXKDSLNVEYAFYXXXRXXK 637
VS E+G LA E +KF+E S K ++NV+ AF+ R K
Sbjct: 131 QVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIK 171
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 162 bits (394), Expect = 5e-41
Identities = 79/165 (47%), Positives = 104/165 (63%)
Frame = +2
Query: 152 FKXLLIGASGVGXXSXLFXFSEXAFNISFISTIGIDFKIRTIXLDGXKVKLXIWXTAGXE 331
FK LLIG SGVG L F++ + S+ISTIG+DFKIRT L+G VKL IW TAG E
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQE 68
Query: 332 XFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNXEEXASADVEKMILGNKCDLXSQ 511
FRTIT++YYRG+ GI++VYDVT++ SF N+K W++ + A V ++++GNK D+ +
Sbjct: 69 RFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDK 128
Query: 512 RXVSKERGXXLAIEYXIKFVEXSXKDSLNVEYAFYXXXRXXKAXM 646
+ V A I F+E S KDS NVE AF R K M
Sbjct: 129 KVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERM 173
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 152 bits (368), Expect = 7e-38
Identities = 71/154 (46%), Positives = 97/154 (62%)
Frame = +2
Query: 152 FKXLLIGASGVGXXSXLFXFSEXAFNISFISTIGIDFKIRTIXLDGXKVKLXIWXTAGXE 331
FK +LIG SGVG + L F+ FNI STIG++F R I LD K+K IW TAG E
Sbjct: 11 FKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQE 70
Query: 332 XFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNXEEXASADVEKMILGNKCDLXSQ 511
+R IT+AYYRG++G ++VYD+T + SF+N+ W++ E A +++ M++GNK DL
Sbjct: 71 RYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHL 130
Query: 512 RXVSKERGXXLAIEYXIKFVEXSXKDSLNVEYAF 613
R VS E A E + F+E S D+ NVE AF
Sbjct: 131 RAVSTEEAQAFAAENNLSFIETSAMDASNVEEAF 164
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 113 bits (271), Expect = 4e-26
Identities = 58/154 (37%), Positives = 86/154 (55%)
Frame = +2
Query: 152 FKXLLIGASGVGXXSXLFXFSEXAFNISFISTIGIDFKIRTIXLDGXKVKLXIWXTAGXE 331
FK + +G VG S + F F+ ++ +TIGIDF +T+ L+ V+L +W TAG E
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71
Query: 332 XFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNXEEXASADVEKMILGNKCDLXSQ 511
FR++ +Y R S ++VYD+TN SF N + WI + DV +++GNK DL +
Sbjct: 72 RFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADK 131
Query: 512 RXVSKERGXXLAIEYXIKFVEXSXKDSLNVEYAF 613
R V++E G A E I +E S K NV+ F
Sbjct: 132 RQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLF 165
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 102 bits (244), Expect = 7e-23
Identities = 59/158 (37%), Positives = 82/158 (51%), Gaps = 5/158 (3%)
Frame = +2
Query: 155 KXLLIGASGVGXXSXLFXFSEXAFNISFISTIGIDFKIRTIXL----DGXKVKLXIWXTA 322
K +L G SG G L F + ++ T+GIDF R I + ++KL IW TA
Sbjct: 11 KIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTA 70
Query: 323 GXEXFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNXEEXASADVEKMILGNKCDL 502
G E FR++ YYRG+ G +LVYDVTN+ SFE + +W+ + A + + ++ G+K DL
Sbjct: 71 GQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDL 130
Query: 503 XSQRXVSKERGXXLAIEYXIKFV-EXSXKDSLNVEYAF 613
+QR VS E E I E S NVE F
Sbjct: 131 QNQRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECF 168
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 98.7 bits (235), Expect = 9e-22
Identities = 57/159 (35%), Positives = 87/159 (54%), Gaps = 6/159 (3%)
Frame = +2
Query: 155 KXLLIGASGVGXXSXLFXFSEXAFNISFISTIGIDFKIRTIXLDGXKVKLXIWXTAGXEX 334
K +++G SGVG S + + F+ + +TIG DF + + +D V L +W TAG E
Sbjct: 10 KVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQER 69
Query: 335 FRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNXEEXASADVEK----MILGNKCDL 502
F+++ A+YRG+ +LVYDV N KSFE + +W AS + ++LGNK D+
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVDV 129
Query: 503 XSQ-RXVSKERGXXLA-IEYXIKFVEXSXKDSLNVEYAF 613
Q R VSK + I + E S K+++NV+ AF
Sbjct: 130 EEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAF 168
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 94.7 bits (225), Expect = 1e-20
Identities = 55/155 (35%), Positives = 79/155 (50%), Gaps = 2/155 (1%)
Frame = +2
Query: 155 KXLLIGASGVGXXSXLFXFSEXAFNISFISTIGIDFKIRTIXLD-GXKVKLXIWXTAGXE 331
K +L+G S VG S + F + F+ STIG F +T+ +D VKL IW TAG E
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 332 XFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNXEEXASADVEKMILGNKCDLXSQ 511
++++ YYR + ++VYD+T S E K+WI+ + A + + GNK DL +
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQE 135
Query: 512 -RXVSKERGXXLAIEYXIKFVEXSXKDSLNVEYAF 613
R V K A E + F E S K + NV F
Sbjct: 136 RRAVEKADAEAYAAEANLLFFETSAKTAENVNELF 170
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 84.6 bits (200), Expect = 2e-17
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 1/171 (0%)
Frame = +2
Query: 152 FKXLLIGASGVGXXSXLFXFSEXAFNISFISTIGIDFKIRTIXLDGXKVKLXIWXTAGXE 331
+K +++G GVG + + F + TI ++ + +DG L + TAG E
Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYR-KKCEIDGEGALLDVLDTAGQE 67
Query: 332 XFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNXEEXASADVEKMIL-GNKCDLXS 508
+ + Y R G +LVY++T+ SF+ I + + D ++L NKCDL +
Sbjct: 68 EYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEA 127
Query: 509 QRXVSKERGXXLAIEYXIKFVEXSXKDSLNVEYAFYXXXRXXKAXMEKKQE 661
+R VS+ G LA +VE S K LNVE AFY R + + +++
Sbjct: 128 ERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTIRRYNKSEEK 178
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 84.2 bits (199), Expect = 2e-17
Identities = 46/130 (35%), Positives = 74/130 (56%), Gaps = 4/130 (3%)
Frame = +2
Query: 155 KXLLIGASGVGXXSXLFXFSEXAFNISFISTIGIDFKIRTIXLDGXKVKLXIWXTAGXEX 334
K +++G SGVG + F F+ + +TIG DF + + +D V L +W TAG E
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 335 FRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNXEEXASAD---VEKMILGNKCDL- 502
F+++ A+YRG+ ++VY+V N KSF++++NW + S D +I+GN+ D
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQIDKD 129
Query: 503 XSQRXVSKER 532
S+R VS R
Sbjct: 130 ASKRAVSLHR 139
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 68.5 bits (160), Expect = 1e-12
Identities = 52/175 (29%), Positives = 83/175 (47%), Gaps = 2/175 (1%)
Frame = +2
Query: 164 LIGASGVGXXSXLFXFSEXAFNISFISTIGIDFKIRTIXLDGXKVKLXIWXTAGXEXFRT 343
++G+ VG S + E F S+ TI F + I G + I TAG + +
Sbjct: 11 VLGSRSVGKSSLTVQYVENHFVESYYPTIENTFS-KNIKYKGQEFATEIIDTAGQDEYSI 69
Query: 344 ITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRN--XEEXASADVEKMILGNKCDLXSQRX 517
+ + + G G +LVY +T++ SFE +K +R+ + V +++GNK DL QR
Sbjct: 70 LNSKHSIGIHGYVLVYSITSKSSFEMVK-IVRDKILNHTGTEWVPIVVVGNKSDLHMQRA 128
Query: 518 VSKERGXXLAIEYXIKFVEXSXKDSLNVEYAFYXXXRXXKAXMEKKQEXSXPSGG 682
V+ E G LA E+ + E S + + NV AF + +EK+ S P G
Sbjct: 129 VTAEEGKALANEWKCAWTEASARHNENVARAF----ELIISEIEKQANPSPPGDG 179
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 61.7 bits (143), Expect = 1e-10
Identities = 37/160 (23%), Positives = 76/160 (47%), Gaps = 1/160 (0%)
Frame = +2
Query: 152 FKXLLIGASGVGXXSXLFXFSEXAFNISFISTIGIDFKIRTIXLDGXKVKLXIWXTAGXE 331
FK +L+G G G + + F +I+T+G++ + ++ +W TAG E
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69
Query: 332 XFRTITTAYY-RGSMGIMLVYDVTNEKSFENIKNWIRNXEEXASADVEKMILGNKCDLXS 508
+ YY +G GI +++DVT+ +++N+ +W R+ ++ ++ GNK D+
Sbjct: 70 KLGGLRDGYYIQGQCGI-IMFDVTSRITYKNVPHWWRDLVRVCE-NIPIVLCGNKVDVKE 127
Query: 509 QRXVSKERGXXLAIEYXIKFVEXSXKDSLNVEYAFYXXXR 628
++ K + + +++ + S K + N E F R
Sbjct: 128 RKV--KAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLAR 165
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 53.6 bits (123), Expect = 3e-08
Identities = 25/112 (22%), Positives = 53/112 (47%)
Frame = +2
Query: 164 LIGASGVGXXSXLFXFSEXAFNISFISTIGIDFKIRTIXLDGXKVKLXIWXTAGXEXFRT 343
+IG S +G S + + + +F+ T+G++F +TI + ++ IW G F
Sbjct: 15 MIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVN 74
Query: 344 ITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNXEEXASADVEKMILGNKCD 499
+ ++ I+ ++D++ + + +IK W R V +++G K D
Sbjct: 75 MLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAV-PILIGTKYD 125
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 52.8 bits (121), Expect = 6e-08
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 10/163 (6%)
Frame = +2
Query: 155 KXLLIGASGVGXXSXLFXFSEXAFNISFISTIGIDFKIRTIXLDGXKVKLXIWXTAGXEX 334
K +++G G S L F++ F + TI ++ I I +DG ++L +W TAG E
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENY-IHDIFVDGNSIELSLWDTAGQEE 73
Query: 335 FRTITTAYYRGSMGIMLVYDVTNEKSFEN-IKNWIRNXEEXASADVEKMILGNKCDLXS- 508
+ + + Y + IM+ + V + S EN I W+ V+ +++ KCDL
Sbjct: 74 YDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPG-VKLVLVALKCDLRGA 132
Query: 509 -------QRXVSKERGXXLAIEY-XIKFVEXSXKDSLNVEYAF 613
+ + E G A + ++++E S K + V AF
Sbjct: 133 DEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAF 175
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 51.2 bits (117), Expect = 2e-07
Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 14/190 (7%)
Frame = +2
Query: 155 KXLLIGASGVGXXSXLFXFSEXAFNISFISTIGIDFKIRTIXLDGXKVKLXIWXTAGXEX 334
K +++G G L FS+ F ++ T+ ++ + + +DG V+L +W TAG E
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHVELALWDTAGQED 66
Query: 335 FRTITTAYYRGSMGIMLVYDVTNEKSFENI-KNWIRNXEEXASADVEKMILGNKCDL--- 502
+ + Y S I++ + V + S +N+ + WI S+ + +++ K DL
Sbjct: 67 YDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSS-LPILLVACKADLRND 125
Query: 503 ---------XSQRXVSKERGXXLAIEY-XIKFVEXSXKDSLNVEYAFYXXXRXXKAXMEK 652
+Q V+ E G +A + K++E S K + V F R A M K
Sbjct: 126 PKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFESATR---AAMLK 182
Query: 653 KQEXSXPSGG 682
+ PS G
Sbjct: 183 HKPKVKPSSG 192
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 50.8 bits (116), Expect = 2e-07
Identities = 29/126 (23%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Frame = +2
Query: 155 KXLLIGASGVGXXSXLFXFSEXAFNISFISTIGIDFKIRTIXLDGXKVKLXIWXTAGXEX 334
K +++G G L FS+ F ++ T+ ++ + + +DG ++L +W TAG E
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHIELALWDTAGQED 66
Query: 335 FRTITTAYYRGSMGIMLVYDVTNEKSFENI-KNWIRNXEEXASADVEKMILGNKCDLXSQ 511
+ + Y S +++ + V +S +N+ + WI S ++ +++G K DL +
Sbjct: 67 YDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCS-NLPILLVGCKVDLRND 125
Query: 512 RXVSKE 529
+E
Sbjct: 126 PKTIEE 131
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 49.2 bits (112), Expect = 7e-07
Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Frame = +2
Query: 155 KXLLIGASGVGXXSXLFXFSEXAFNISFISTIGIDFKIRTIXLDGXKVKLXIWXTAGXEX 334
K +++G G S L F+ F ++ T+ ++ + +DG V+L +W TAG E
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENY-VSDCRVDGKSVQLALWDTAGQEE 68
Query: 335 FRTITTAYYRGSMGIMLVYDVTNEKSFENIK-NWIRNXEEXASADVEKMILGNKCDLXSQ 511
+ + Y + I++ + + + S EN+ WI +V +++G K DL S
Sbjct: 69 YERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLC-PNVPFILVGMKADLRSD 127
Query: 512 RXVSKE 529
+E
Sbjct: 128 PVAIEE 133
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 44.0 bits (99), Expect = 3e-05
Identities = 28/126 (22%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Frame = +2
Query: 155 KXLLIGASGVGXXSXLFXFSEXAFNISFISTIGIDFKIRTIXLDGXKVKLXIWXTAGXEX 334
K +++G VG L ++ F ++ T+ ++ + T+ + L ++ TAG E
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAV-TVMIGDEPYTLGLFDTAGQED 63
Query: 335 FRTITTAYYRGSMGIMLVYDVTNEKSFENIK-NWIRNXEEXASADVEKMILGNKCDLXSQ 511
+ + Y + ++ + VT+ SFEN+K W V +I+G + DL
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPG-VPCLIVGTQIDLRDD 122
Query: 512 RXVSKE 529
V ++
Sbjct: 123 PSVQQK 128
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 41.5 bits (93), Expect = 1e-04
Identities = 36/167 (21%), Positives = 67/167 (40%), Gaps = 14/167 (8%)
Frame = +2
Query: 155 KXLLIGASGVGXXSXLFXFSEXAFNISFISTIGIDFKIR-TIXLDGXKVKLXIWXTAGXE 331
K +++G G G L FS F ++ T+ ++ T + ++L +W TAG E
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 332 XFRTITTAYYRGSMGIMLVYDVTNEKSFENI-KNWIRNXEEXASADVEKMILGNKCDLXS 508
+ + Y S I+L + + S N+ + W + +++G K DL
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPR-TPIVLVGLKADLRK 134
Query: 509 QR------------XVSKERGXXLAIEYXIKFVEXSXKDSLNVEYAF 613
R V+ ++ +A+ +VE S K++ V F
Sbjct: 135 DRNATEVLRTQGLTPVTYQQAQSVALSMNAPYVECSAKENTGVNEVF 181
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,686,764
Number of Sequences: 5004
Number of extensions: 20258
Number of successful extensions: 54
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 416455520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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