Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_E09
         (878 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    26   0.40 
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            25   1.2  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    22   8.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   8.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   8.6  
AY739659-1|AAU85298.1|  288|Apis mellifera hyperpolarization-act...    22   8.6  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    22   8.6  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    22   8.6  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 26.2 bits (55), Expect = 0.40
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -3

Query: 195 SVEKHTV--LNETPIGNTITDFTSYYYPRFVISAIHCRL 85
           S E+H    L+ TP    ++   S+Y P  V+  I+CRL
Sbjct: 177 SKEEHPTCALDLTPTYAVVSSSISFYVPCIVMLGIYCRL 215


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 318 NGDSFDLRANFSVC 277
           NGD +DL+ N  VC
Sbjct: 426 NGDQYDLKKNLKVC 439


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 442 CSRCTYCRHDVHSLQKPLQQ 501
           C+ CTY     HSL+  L++
Sbjct: 47  CANCTYATKYCHSLKLHLRK 66


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -1

Query: 272 LHDNRKSVSLVTFFLSYRALVIAVSLQWKST 180
           LH N    S+ +F      + ++ SLQW ST
Sbjct: 470 LH-NSSPFSIYSFLERLNLIFMSSSLQWSST 499


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -1

Query: 272 LHDNRKSVSLVTFFLSYRALVIAVSLQWKST 180
           LH N    S+ +F      + ++ SLQW ST
Sbjct: 508 LH-NSSPFSIYSFLERLNLIFMSSSLQWSST 537


>AY739659-1|AAU85298.1|  288|Apis mellifera
           hyperpolarization-activated ion channelvariant T
           protein.
          Length = 288

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 131 LVKSVIVLPIGVSFSTVCFST 193
           LV ++I+LP+ +SF     ST
Sbjct: 99  LVANLIILPVAISFFNDDLST 119


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 131 LVKSVIVLPIGVSFSTVCFST 193
           LV ++I+LP+ +SF     ST
Sbjct: 99  LVANLIILPVAISFFNDDLST 119


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 131 LVKSVIVLPIGVSFSTVCFST 193
           LV ++I+LP+ +SF     ST
Sbjct: 99  LVANLIILPVAISFFNDDLST 119


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,409
Number of Sequences: 438
Number of extensions: 3707
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)