Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP18_F_E06
         (947 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          36   7e-04
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      36   7e-04
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    33   0.005
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   1.8  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              23   5.3  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 35.5 bits (78), Expect = 7e-04
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
 Frame = +3

Query: 177 DAVFVEKQKKILSFFQDVSQLNTDD-EYYKIGKDYDIK--MASFMDKN 311
           D  F+ KQKKI      V Q +  D E+Y +G++YD++  M  + DKN
Sbjct: 29  DMDFLHKQKKIFDLLLYVRQADLSDAEWYDVGRNYDMESNMDMYKDKN 76


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 35.5 bits (78), Expect = 7e-04
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
 Frame = +3

Query: 177 DAVFVEKQKKILSFFQDVSQLNTDD-EYYKIGKDYDIK--MASFMDKN 311
           D  F+ KQKKI      V Q +  D E+Y +G++YD++  M  + DKN
Sbjct: 29  DMDFLHKQKKIFDLLLYVRQADLSDAEWYDVGRNYDMESNMDMYKDKN 76


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 32.7 bits (71), Expect = 0.005
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +3

Query: 159 IKTKNVDAVFVEKQKKILSFFQDVSQLNTDDEYYKIGKDYDIKMASFMDKN 311
           +K +  D   + KQ+ ++   Q +SQ   + E   +G  YDI+  S   KN
Sbjct: 20  VKQRAADQDLLNKQQDVIQLLQKISQPIPNQELQNLGASYDIESNSHQYKN 70


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = +3

Query: 222 QDVSQLNTDDEYYKIGKDYDIKMASFM-DKNYN 317
           Q V ++ T++E  K GK+YD    +++ D +YN
Sbjct: 524 QYVGEVITNEEAEKRGKEYDAAGRTYLFDLDYN 556


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 12/39 (30%), Positives = 24/39 (61%)
 Frame = +3

Query: 201 KKILSFFQDVSQLNTDDEYYKIGKDYDIKMASFMDKNYN 317
           K+I++   D  ++N +DE  ++  +  +K  SF+DK+ N
Sbjct: 41  KQIINDVND-GKINIEDENVQLYIECAMKKFSFVDKDGN 78


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,454
Number of Sequences: 438
Number of extensions: 2387
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31081323
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)