Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP18_F_E04
(886 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 68 1e-11
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 68 1e-11
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 60 3e-09
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 45 8e-05
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 29 4.4
AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical ... 29 4.4
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 29 4.4
Z81547-3|CAB04461.1| 253|Caenorhabditis elegans Hypothetical pr... 28 7.7
AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical ... 28 7.7
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 67.7 bits (158), Expect = 1e-11
Identities = 56/186 (30%), Positives = 78/186 (41%), Gaps = 38/186 (20%)
Frame = +3
Query: 198 CYRNQRPVCGTDGKTYNNECLLDCAT-RDDPGLRVRYQG-------PCSEGNVGF-PTC- 347
C N VCGTDGKTY NEC L A ++ + V +G PC + GF +C
Sbjct: 323 CTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCV 382
Query: 348 -------------HCDYELNQVCGSDNHTYDXXXXXXXXXX-TNPGLSILYSGLCA---- 473
C+ + VC ++ T+D T + + + G C
Sbjct: 383 VKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGVC 442
Query: 474 ---DEVK------IVDGPSKYPSCTCTREMKPVCGSDGITYNNDC-LLNCATINDSRLGI 623
D K +VDG K +CT E K VCGSDG TY+N+C L N A + + +
Sbjct: 443 ATFDSCKKPQVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFV 502
Query: 624 EYYGPC 641
+Y C
Sbjct: 503 KYNSAC 508
Score = 54.8 bits (126), Expect = 8e-08
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 42/190 (22%)
Frame = +3
Query: 198 CYRNQRPVCGTDGKTYNNECLL---DCATRDDPGLRVRYQGPCSEGNV------------ 332
C RPVC T+G+T++NEC + C T+ ++V++QG C G
Sbjct: 397 CEDVMRPVCATNGETFDNECEMKKKSCETKSM--IKVKHQGTCGIGVCATFDSCKKPQVC 454
Query: 333 ----GFPTC---HCDYELNQVCGSDNHTY-DXXXXXXXXXXTNPGLSILYSGLC-ADEVK 485
G P C C E +VCGSD TY + + + Y+ C A ++K
Sbjct: 455 VVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLK 514
Query: 486 ---------IVDGPSKYPSCTCT--------REMKPVCGSDGITYNNDCLLNCATINDSR 614
V G ++ C C E K VCG+DG+TY+++C + + + S+
Sbjct: 515 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSK 574
Query: 615 LGI-EYYGPC 641
+ + G C
Sbjct: 575 FVMTAFEGKC 584
Score = 41.5 bits (93), Expect = 8e-04
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +3
Query: 510 PSCTCTREMKPVCGSDGITYNNDCLLNCATINDSR 614
P+C + P+CGSDGI YNN C LN + D R
Sbjct: 684 PTCNLSSNY-PICGSDGIVYNNQCHLNTISCRDQR 717
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +3
Query: 159 QVIATLAYPPSC---ACYRNQRPVCGTDGKTYNNEC-LLDCATRDDPGLRVRYQGPC 317
QV + P C +C + VCG+DGKTY+NEC L + A + V+Y C
Sbjct: 452 QVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSAC 508
Score = 35.9 bits (79), Expect = 0.039
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +3
Query: 183 PPSCACYRNQ--RPVCGTDGKTYNNEC-LLDCATRDDPGLRVRYQGPCSE 323
P C Y + + VCGTDG TY++EC + A + ++G C E
Sbjct: 537 PDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKCDE 586
Score = 35.9 bits (79), Expect = 0.039
Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 10/56 (17%)
Frame = +3
Query: 468 CADEVKIVDGPSKYPSCTCTREMK----------PVCGSDGITYNNDCLLNCATIN 605
C K V PS +P C C + VCGSDG TY+N C L N
Sbjct: 845 CFHGAKCVPSPSSFPDCICPQSCNMNHLGIVANMTVCGSDGTTYSNLCELKMFACN 900
Score = 34.7 bits (76), Expect = 0.089
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Frame = +3
Query: 495 GPSKYPSCTC----TREMKPVCGSDGITYNNDCLLNCATINDSR 614
G + P C C T VCG+DG TY N+C L A + +
Sbjct: 310 GVDRRPECKCSEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQK 353
Score = 33.9 bits (74), Expect = 0.16
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +3
Query: 186 PSCACYRNQRPVCGTDGKTYNNECLLD-CATRDDPGLRVRYQGPCSEGNVGFPTCHCDYE 362
P+C N P+CG+DG YNN+C L+ + RD + V P +G +
Sbjct: 684 PTCNLSSNY-PICGSDGIVYNNQCHLNTISCRDQREIHVL---PLISHWIGESRVLDSCQ 739
Query: 363 LNQVCGSDNHTYD 401
N+V GS HT D
Sbjct: 740 CNRV-GSFGHTCD 751
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 67.7 bits (158), Expect = 1e-11
Identities = 56/186 (30%), Positives = 78/186 (41%), Gaps = 38/186 (20%)
Frame = +3
Query: 198 CYRNQRPVCGTDGKTYNNECLLDCAT-RDDPGLRVRYQG-------PCSEGNVGF-PTC- 347
C N VCGTDGKTY NEC L A ++ + V +G PC + GF +C
Sbjct: 331 CTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCV 390
Query: 348 -------------HCDYELNQVCGSDNHTYDXXXXXXXXXX-TNPGLSILYSGLCA---- 473
C+ + VC ++ T+D T + + + G C
Sbjct: 391 VKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGVC 450
Query: 474 ---DEVK------IVDGPSKYPSCTCTREMKPVCGSDGITYNNDC-LLNCATINDSRLGI 623
D K +VDG K +CT E K VCGSDG TY+N+C L N A + + +
Sbjct: 451 ATFDSCKKPQVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFV 510
Query: 624 EYYGPC 641
+Y C
Sbjct: 511 KYNSAC 516
Score = 54.8 bits (126), Expect = 8e-08
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 42/190 (22%)
Frame = +3
Query: 198 CYRNQRPVCGTDGKTYNNECLL---DCATRDDPGLRVRYQGPCSEGNV------------ 332
C RPVC T+G+T++NEC + C T+ ++V++QG C G
Sbjct: 405 CEDVMRPVCATNGETFDNECEMKKKSCETKSM--IKVKHQGTCGIGVCATFDSCKKPQVC 462
Query: 333 ----GFPTC---HCDYELNQVCGSDNHTY-DXXXXXXXXXXTNPGLSILYSGLC-ADEVK 485
G P C C E +VCGSD TY + + + Y+ C A ++K
Sbjct: 463 VVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLK 522
Query: 486 ---------IVDGPSKYPSCTCT--------REMKPVCGSDGITYNNDCLLNCATINDSR 614
V G ++ C C E K VCG+DG+TY+++C + + + S+
Sbjct: 523 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSK 582
Query: 615 LGI-EYYGPC 641
+ + G C
Sbjct: 583 FVMTAFEGKC 592
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +3
Query: 159 QVIATLAYPPSC---ACYRNQRPVCGTDGKTYNNEC-LLDCATRDDPGLRVRYQGPC 317
QV + P C +C + VCG+DGKTY+NEC L + A + V+Y C
Sbjct: 460 QVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSAC 516
Score = 35.9 bits (79), Expect = 0.039
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +3
Query: 183 PPSCACYRNQ--RPVCGTDGKTYNNEC-LLDCATRDDPGLRVRYQGPCSE 323
P C Y + + VCGTDG TY++EC + A + ++G C E
Sbjct: 545 PDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKCDE 594
Score = 35.1 bits (77), Expect = 0.067
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 10/50 (20%)
Frame = +3
Query: 468 CADEVKIVDGPSKYPSCTCTREMK----------PVCGSDGITYNNDCLL 587
C K V PS +P C C + VCGSDG TY+N C L
Sbjct: 784 CFHGAKCVPSPSSFPDCICPQSCNMNHLGIVANMTVCGSDGTTYSNLCEL 833
Score = 34.7 bits (76), Expect = 0.089
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Frame = +3
Query: 495 GPSKYPSCTC----TREMKPVCGSDGITYNNDCLLNCATINDSR 614
G + P C C T VCG+DG TY N+C L A + +
Sbjct: 318 GVDRRPECKCSEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQK 361
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 59.7 bits (138), Expect = 3e-09
Identities = 44/139 (31%), Positives = 59/139 (42%), Gaps = 5/139 (3%)
Frame = +3
Query: 183 PPSCACYRNQRPVCGTDGKTYNNECLLDCATRDDPGLRVRYQGPCSEGNVGFPTCHCDYE 362
PP C C RPVCGTD TYNN C L C R + L Y G C + C+
Sbjct: 16 PPDCDCPSVIRPVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTCCDKK------ECEKV 69
Query: 363 LNQVCGS--DNHTYD-XXXXXXXXXXTNPGLSI--LYSGLCADEVKIVDGPSKYPSCTCT 527
+C + + H D + GLS+ L+ G C+ + +CT T
Sbjct: 70 GTPICDNFGETHINDCHFAQFQCIMKKSMGLSLTKLHMGRCSSK-------DCNHNCTNT 122
Query: 528 REMKPVCGSDGITYNNDCL 584
E PVC ++G Y N C+
Sbjct: 123 -EFDPVCDTNGSVYRNLCV 140
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = +3
Query: 480 VKIVDGPSKYPSCTCTREMKPVCGSDGITYNNDCLLNCATINDSRLGIEYYGPCAD 647
+ + G S P C C ++PVCG+D +TYNN C L C + L Y G C D
Sbjct: 7 ILLFTGFSPPPDCDCPSVIRPVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTCCD 62
Score = 43.6 bits (98), Expect = 2e-04
Identities = 34/136 (25%), Positives = 54/136 (39%), Gaps = 2/136 (1%)
Frame = +3
Query: 189 SCACYRNQRPVCGTDGKTYNNECLL--DCATRDDPGLRVRYQGPCSEGNVGFPTCHCDYE 362
S C + P+CGT+G T+ N C L + + + V Y G C + N C +
Sbjct: 769 SMECDNSYDPLCGTNGVTFTNACSLQKEICESANSTIEVAYTGMCCDTN-------CPSD 821
Query: 363 LNQVCGSDNHTYDXXXXXXXXXXTNPGLSILYSGLCADEVKIVDGPSKYPSCTCTREMKP 542
+ VC S T+ L D+ ++ + K + C +E P
Sbjct: 822 FSPVCDSKGSTHQNICHFGVKRCI--AERTFGDVLTIDKFEVCN-EVKECNNACPKEYSP 878
Query: 543 VCGSDGITYNNDCLLN 590
VC S+G N+C L+
Sbjct: 879 VCASNGQNIVNECELD 894
Score = 41.1 bits (92), Expect = 0.001
Identities = 37/138 (26%), Positives = 52/138 (37%), Gaps = 7/138 (5%)
Frame = +3
Query: 198 CYRNQRPVCGTDGKTYNNECLLDCATRDDPGLRVRYQGPCSE---GNVGFPTCHCDYELN 368
C ++ P+C +D TY N C D L V ++G CSE P + E +
Sbjct: 590 CTDDKHPICASDFSTYENLCQFRKQKCLDSELEVLFKGKCSECLDSPCALPAENSPDE-S 648
Query: 369 QVCGSDNHTYDXXXXXXXXXXTNPG----LSILYSGLCADEVKIVDGPSKYPSCTCTREM 536
VC D T G L++ Y G+C V+ D T +
Sbjct: 649 FVCLEDQSTKSLCEYQMLSCIFERGYGVNLTVQYIGVCCPPVESCD----------TEKP 698
Query: 537 KPVCGSDGITYNNDCLLN 590
PVC G T+ +C LN
Sbjct: 699 DPVCTDSGATFLTECELN 716
Score = 40.7 bits (91), Expect = 0.001
Identities = 45/155 (29%), Positives = 59/155 (38%), Gaps = 13/155 (8%)
Frame = +3
Query: 216 PVCGTDGKTYNNECLLD---C--ATRDDPGLRVRYQGPCSEGNVGFPTCHCDYELNQVC- 377
PVC T+G T+ N CL+D C ++ ++V YQG C CD + VC
Sbjct: 931 PVCDTEGVTHANMCLMDQNACIQMKKNKKTIQVSYQGQCCNQ-------PCDEDKTPVCD 983
Query: 378 GSDNH--TYDXXXXXXXXXXTNPGLSILYSGLCADEVKIVDGPSKYPSCTCTREMKPVCG 551
G+ H N LSI YSG C P C VC
Sbjct: 984 GTITHPNICRFRIAQCEAERVNKTLSIAYSGECC----------LLPKGEC-ESSGAVCD 1032
Query: 552 SDGITYNNDCLLN-----CATINDSRLGIEYYGPC 641
S+G T+ N C+ TI+ L I + G C
Sbjct: 1033 SEGQTHMNHCVYQQRRCMAQTISQKTLNIVHTGEC 1067
Score = 37.1 bits (82), Expect = 0.017
Identities = 36/163 (22%), Positives = 58/163 (35%), Gaps = 15/163 (9%)
Frame = +3
Query: 198 CYRNQRPVCGTDGKTYNNEC---LLDCATRDDPG--LRVRYQGPCSEGNVGFPTCHCDYE 362
C ++ PVC T +T+ N C C G + + + G C TC D +
Sbjct: 257 CDKSWDPVCDTRNRTHKNVCQFKFFACKINKIDGSVIDIAHSGACRARKSTCITCPKDEK 316
Query: 363 LNQVCGSDNHTYDXXXXXXXXXXT-----NPGLSILYSGLCADEVKIVDGPSKYPSCTCT 527
+C + N T+ + +++ C + + TC+
Sbjct: 317 KIPICDNRNMTHPTLCSFIQYNCEARNNEDEERVLVHIKSCHERSPQFTLKDEICPRTCS 376
Query: 528 REMKPVCGSDGITYNNDCLLNCATINDSRLGI-----EYYGPC 641
R++KPVC T+ N C N +LGI Y PC
Sbjct: 377 RDVKPVCDEANNTHQNLCHFQQYNCNMRKLGIRSPYLRYLRPC 419
Score = 37.1 bits (82), Expect = 0.017
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +3
Query: 513 SCTCTREMKPVCGSDGITYNNDCLLN---CATINDSRLGIEYYGPCAD 647
S C P+CG++G+T+ N C L C + N S + + Y G C D
Sbjct: 769 SMECDNSYDPLCGTNGVTFTNACSLQKEICESAN-STIEVAYTGMCCD 815
Score = 35.5 bits (78), Expect = 0.051
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 522 CTREMKPVCGSDGITYNNDCLLNCATINDSRLGIEYYGPCAD 647
CT + P+C SD TY N C DS L + + G C++
Sbjct: 590 CTDDKHPICASDFSTYENLCQFRKQKCLDSELEVLFKGKCSE 631
Score = 33.1 bits (72), Expect = 0.27
Identities = 38/152 (25%), Positives = 57/152 (37%), Gaps = 19/152 (12%)
Frame = +3
Query: 183 PPSCACYRNQR-PVCGTDGKTYNNECLL---DCATR--DDPGLRVRYQGPCSE------- 323
PP +C + PVC G T+ EC L +C + D P L V QG C +
Sbjct: 688 PPVESCDTEKPDPVCTDSGATFLTECELNIENCKLKKLDQPKLVVVSQGICEKDMLTDDF 747
Query: 324 -GNVGFPTCHCDYELNQV--CGSD-NHTYDXXXXXXXXXXTNPGLSILYSGLCADEVKIV 491
N F + +++ C + +++YD TN L +C +
Sbjct: 748 SSNRNFQKPNIEFKRENTFNCSMECDNSYDPLCGTNGVTFTN--ACSLQKEICESANSTI 805
Query: 492 DGPSKYPSC--TCTREMKPVCGSDGITYNNDC 581
+ C C + PVC S G T+ N C
Sbjct: 806 EVAYTGMCCDTNCPSDFSPVCDSKGSTHQNIC 837
Score = 32.7 bits (71), Expect = 0.36
Identities = 36/166 (21%), Positives = 59/166 (35%), Gaps = 6/166 (3%)
Frame = +3
Query: 186 PSCACYRNQRPVCGTDGKTYNNECLLDCATRDDPGLRVRYQGPCSEGNVGFPTCH--CDY 359
P C + +PVC + G + N C + + E + C C
Sbjct: 533 PKPNCPTDGQPVCDSAGNLHGNLCEFTYSRCIAASKGHQIHIATEENCISKEACQMPCTD 592
Query: 360 ELNQVCGSDNHTYDXXXXXXXXXXTNPGLSILYSGLCADEVKIVDGPSKYPSCTCTREMK 539
+ + +C SD TY+ + L +L+ G C++ +D P P+ E
Sbjct: 593 DKHPICASDFSTYENLCQFRKQKCLDSELEVLFKGKCSE---CLDSPCALPAENSPDE-S 648
Query: 540 PVCGSDGITYN--NDCLLNCATIN--DSRLGIEYYGPCADXVIXVD 665
VC D T + +L+C L ++Y G C V D
Sbjct: 649 FVCLEDQSTKSLCEYQMLSCIFERGYGVNLTVQYIGVCCPPVESCD 694
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Frame = +3
Query: 195 ACYRNQRPVCGTDGKT-------YNNECLLDCATRDDPGLRVRYQGPCSEGNVGFPTCHC 353
+C + +PVC + G+T +N++C+ D + L + YQG C C
Sbjct: 1072 SCPKTGQPVCDSRGRTHDSLCHFHNSKCIFDKIHTQNTTLTLDYQGKCCPAG-------C 1124
Query: 354 DYELNQVCGSDNHTY 398
EL+ +C + Y
Sbjct: 1125 TDELSVICDQHENIY 1139
Score = 29.1 bits (62), Expect = 4.4
Identities = 40/165 (24%), Positives = 64/165 (38%), Gaps = 17/165 (10%)
Frame = +3
Query: 198 CYRNQRPVCGTDGK-TYNNEC---LLDC-ATRDDPGLRVRYQGPCSEGNVGFPTCHCDYE 362
C ++ PVC DG T+ N C + C A R + L + Y G C P C+
Sbjct: 974 CDEDKTPVC--DGTITHPNICRFRIAQCEAERVNKTLSIAYSGECCL----LPKGECESS 1027
Query: 363 LNQVCGSD-----NHTYDXXXXXXXXXXTNPGLSILYSGLCADEVKIVDGPSKYPSCTCT 527
VC S+ NH + L+I+++G C +C
Sbjct: 1028 -GAVCDSEGQTHMNHCVYQQRRCMAQTISQKTLNIVHTGECC------------ALASCP 1074
Query: 528 REMKPVCGSDGIT-------YNNDCLLNCATINDSRLGIEYYGPC 641
+ +PVC S G T +N+ C+ + ++ L ++Y G C
Sbjct: 1075 KTGQPVCDSRGRTHDSLCHFHNSKCIFDKIHTQNTTLTLDYQGKC 1119
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 44.8 bits (101), Expect = 8e-05
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 10/163 (6%)
Frame = +3
Query: 189 SCACYRNQRPVCGTDGK---TYNNECLLDCATRDDPGLRVRYQGPCSEGNVGFPTCHCDY 359
+C+C PVC +G TY+N+C+ CA + L + Y+G C +C+
Sbjct: 24 TCSCKPEIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSCCSAR------YCNM 77
Query: 360 ELNQVCGSDNHTYDXXXXXXXXXXTNPGLSILYSGLCADEVKIVDGPSKYPSCT--CTRE 533
VC S+ Y + L + + +D + SCT C E
Sbjct: 78 FEQPVC-SEGQMYQTVCEFEER-------QCIEFKLFKNHIS-MDSSQEKCSCTAPCPTE 128
Query: 534 MKPVCGSDGITYNNDC-LLNCATINDSRLG----IEYYGPCAD 647
PVC G T+ N C LN + ++L ++Y G C +
Sbjct: 129 WNPVCDKKGQTHANFCTFLNSKCYHKNQLNESLEVDYSGVCCE 171
Score = 31.9 bits (69), Expect = 0.63
Identities = 37/159 (23%), Positives = 56/159 (35%), Gaps = 9/159 (5%)
Frame = +3
Query: 174 LAYPPSCA----CYRNQRPVCGTDGKTYNNECLLDCATRDDPGLRVRYQGPCSEGNVGFP 341
L Y SC C ++PVC ++G+ Y C + + L + S
Sbjct: 63 LLYEGSCCSARYCNMFEQPVC-SEGQMYQTVCEFEERQCIEFKLFKNHISMDSSQEKCSC 121
Query: 342 TCHCDYELNQVCGSDNHTYDXXXXXXXXXX-----TNPGLSILYSGLCADEVKIVDGPSK 506
T C E N VC T+ N L + YSG+C +++
Sbjct: 122 TAPCPTEWNPVCDKKGQTHANFCTFLNSKCYHKNQLNESLEVDYSGVCCEDM-------- 173
Query: 507 YPSCTCTREMKPVCGSDGITYNNDCLLNCATINDSRLGI 623
C+ + VC S+G T+ + C A R GI
Sbjct: 174 ---CSAGQTSLTVCDSEGNTHTDICSFYIAKCRQMRRGI 209
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +3
Query: 450 ILYSGLCADEVKIVDGPS---KYPSCTCTREMKPVCGSDGITYNNDCLLNCATIN 605
I + L A + +V+G S K SC C +++P C TY +C+ N
Sbjct: 4 IAIAALLASSLLLVEGTSIRDKRQSCGCAPKIQPSCSCQRTTYTQPQQYSCSCQN 58
>AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.4 protein.
Length = 335
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +3
Query: 450 ILYSGLCADEVKIVDGPS---KYPSCTCTREMKPVCGSDGITYNNDCLLNCATIN 605
I + L A + +V+G S K SC C +++P C TY +C+ N
Sbjct: 4 IAIAALLASSLLLVEGTSIRDKRQSCGCAPKVQPSCSCQRTTYTQPQQYSCSCQN 58
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +3
Query: 450 ILYSGLCADEVKIVDGPS---KYPSCTCTREMKPVCGSDGITYNNDCLLNCATIN 605
I + L A + +V+G S K SC C +++P C TY +C+ N
Sbjct: 4 IAIAALLASSLLLVEGTSIRDKRQSCGCAPKIQPSCSCQRTTYTQPQQYSCSCQN 58
>Z81547-3|CAB04461.1| 253|Caenorhabditis elegans Hypothetical
protein F53F8.4 protein.
Length = 253
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 180 YPPSCACYRNQRPVCG 227
Y PSCA Y RP CG
Sbjct: 32 YQPSCAAYSQPRPSCG 47
>AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.5 protein.
Length = 335
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +3
Query: 450 ILYSGLCADEVKIVDGPS---KYPSCTCTREMKPVCGSDGITYNNDCLLNCATIN 605
I + + A + +V+G S K SC C +++P C TY +C+ N
Sbjct: 4 IAIAAILASSLLLVEGTSIRDKRQSCGCAPKVQPSCSCQRTTYTQPQQYSCSCQN 58
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,814,379
Number of Sequences: 27780
Number of extensions: 371561
Number of successful extensions: 907
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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